Zingiber officinale (ginger): 121969397
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Entry
121969397 CDS
T08725
Name
(RefSeq) ABC transporter B family member 1-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121969397
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
121969397
04147 Exosome [BR:
zof04147
]
121969397
04090 CD molecules [BR:
zof04090
]
121969397
Enzymes [BR:
zof01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
121969397
Transporters [BR:
zof02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
121969397
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121969397
CD molecules [BR:
zof04090
]
Proteins
121969397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
Zeta_toxin
ABC_ATPase
AAA_29
RsgA_GTPase
nSTAND1
AAA_30
DUF815
SbcC_Walker_B
APS_kinase
Mg_chelatase
Rad17
DUF87
DUF1360
Motif
Other DBs
NCBI-GeneID:
121969397
NCBI-ProteinID:
XP_042375423
LinkDB
All DBs
Position
4A:complement(6095220..6100757)
Genome browser
AA seq
1369 aa
AA seq
DB search
MSGQQQLQQAFEQEEVMKRVALVEKWSQPELQAFHLPSPSRPPSHPKGGDMLVAEGVERV
GGGDSLASVYEMGAANAKTEEQPPPQLTAAPPSAGNDGQEDKKPESPAQTVGFVELFRFA
DGLDCALMAVGTVGAIVHGCSLPIFLRFFADLVNSFGSNTDDPSTMASEVAKYAFYFLVV
GAAIWLSSWAEISCWMWTGERQSTKMRIVYLEAALNQDVRYFDTGVRTSDVVFAINAEAV
MVQDAISEKLGNFIHYMATFVSGFVIGFTAAWQLALVTLAVVPLIAVIGGMHTAALAKLS
SKSQDALSQANNIAEQALAQVRTVQSFVGESRVLQAYSAALGVAQKIGYRSGFSKGLGLG
ATYFTVFCCYALLLWYGGFLVRHHHTNGGLAISTMFAVMIGGIALGQSAPSVVAFAKARV
AAAKIYQTIERRPSIDRKNDSGIELGAITGLVELKNVDFAYPSRPDVPVLQDFSLTVAAG
KCIALVGSSGSGKSTVVSLVERFYDPTSGQILLDGQDIKSLKLKWLRQQIGLVSQEPALF
ATTIKENLLLGREGATQVEVEEAARVANAHSFIVKLPNGYDSHVGERGLQLSGGQKQRVA
IARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKVDVVAV
LHQGTVAEIGTHDELMTKGQSGLYAKLIRMQEQAHEAALINARKSSARLSSARNSVSSPI
ITRNSSYGRSPFSRRFSDFNVSEFGISVDTNHPMEHLAFRDQASSFLRLAKMNSPEWSYA
LVASVGSVVCGSMSAFFAYVLSTVLSAYYAQDYKYMRQEIRKYCYLMIGVSSAALLFNTV
QHLFWDVVGENLTKRVREKMLASVLRNEIAWFDREENASARIARRLTSDAHNVRSAIGDR
ISVIVQNVSLLLVAFTAGFILEWRLAMVLVSVFPIVVVATVLQKMFITGFSGDLEGAHTK
ATQIAGEAVANIRTVAAFNSEAKITQLFATNLQAPLVRCFWKGQVAGSGFGVAQLFLYAS
YALGLWYASWLVKHGISDFSKTIRVFMILMVSANGVAEALSLAPDFIKGSCALRSVFELI
DRQTEIEPDDPDATPLPGCIRGEVELKHVDFAYPSCPNLPVLCDLTLRAPAGKMLALVGP
SGCGKSSVISLVQRFYEPTSGRVLIDGKDIKKYNLKALRQAIAVVPQEPCLFASTIFENI
AYGREAATEAEVVEAATLANAHKFISALPDGYRTWLGERGVQLSGGQRQRVAVARALMKK
APILLLDEATSALDAESERSVQDALERSGTERTTIAVAHRLASVRNAHVIAVIDDGKVVE
QGTHSHLLKHHPDGSYARMLQLQRFANGAATANGASSLGPSTSAREATR
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggcagcaacagctgcagcaggcttttgagcaggaggaggtgatgaagcgggtg
gcgttggtggagaaatggagccaacctgagctccaggccttccacctcccgtccccttcc
cgtcctccttcccacccaaaaggcggcgacatgttggtcgccgaaggggtagaaagagtc
ggtggcggtgactcccttgcctctgtctatgagatgggggccgccaatgccaagacggag
gaacaacctccgccgcaattgactgcggcacctccatcggccgggaatgatggccaggaa
gacaagaagcctgagtcgccggcgcagacggtgggattcgttgagctgttccggttcgcc
gatgggctcgactgcgcgctgatggccgtcggcaccgtcggagccatcgtccatgggtgc
tcccttcccatattcctccgcttcttcgccgatctggtcaattcgttcggatccaacact
gacgatcccagcaccatggccagcgaggtcgccaagtatgcattctacttcctcgttgtc
ggcgcggcgatttggttgtcttcctgggccgagatatcgtgttggatgtggacgggggaa
cggcaatccaccaagatgaggatcgtgtacctggaagcagcgctgaaccaggacgtccgc
tacttcgacaccggggtgcgcacctccgacgtcgtcttcgccatcaacgccgaggcggtc
atggtgcaggacgccataagcgagaagcttgggaacttcatccactacatggcgaccttc
gtgtccggctttgtgatagggttcacagcggcgtggcagctcgcgctcgtcacgctcgcc
gtcgttccgctcatcgccgtcatcggcggcatgcacactgccgcactagccaagctgtcg
tccaagagccaggacgccctctcccaggccaacaacatcgcggagcaggcgcttgcccag
gtaaggaccgtgcaatccttcgtcggcgagtcgagagtcctccaagcctactctgccgcg
ctcggagtagctcagaagattggctaccggagcggattctccaaaggccttggcttgggc
gcgacctacttcacagtcttctgctgctacgccttgcttctatggtacggagggtttctc
gtgcgccaccaccacaccaatggcggactagccatctccaccatgttcgccgtcatgatc
ggaggaatagctcttgggcaatcagctccgagcgtagtagcatttgcgaaagcaagggtg
gcagcagcaaagatttaccaaacgattgagcgaaggccaagcatcgaccggaagaacgac
tctgggatcgagttgggtgccattacagggctggtggagttgaagaacgtggattttgct
tacccatcaaggcccgatgtccctgtactccaggatttctcgctcactgttgctgcaggt
aagtgcatcgcattagttggaagcagcggctctgggaagagcaccgtggtttcgctcgtt
gaaagattctacgatcccacttcaggacaaattctacttgatggacaagacatcaaatct
ctgaagctaaagtggctcaggcaacaaattgggctagtgagccaagagcctgctctcttt
gcaaccaccatcaaggagaatcttctccttggcagggaaggtgccacacaagtagaggta
gaagaagctgccagagttgcaaatgctcactctttcattgtgaagctaccaaatggctat
gattcccatgttggagagagagggctgcagctctctggtggccaaaagcaacgtgttgct
atcgccagagcaatgctaaagaatcctgcaattcttctactagatgaggcaactagtgcc
cttgattctgagtctgagaaactcgtgcaagaagctcttgaccgattcatgatcggtcgc
accacgcttgtaattgcgcaccgtctgtcaaccatccgcaaggtcgatgttgttgcagtt
cttcatcaagggaccgtcgcagagattggcacacatgatgaactcatgacgaaaggtcag
agtggactctacgcaaagctaattcgcatgcaggagcaggcacatgaggcagctctcatc
aatgccaggaagagcagtgcaaggctttcaagtgctagaaattcagtgagctccccaatt
attaccaggaactcatcgtatggccgatccccattttcccgtcgtttctccgacttcaat
gtatctgaattcggcatctcagtcgatacaaaccacccaatggagcatcttgcatttcga
gaccaggctagctcattcttgcgtcttgcgaagatgaactcaccagaatggtcgtacgcc
ctagtagcttcagtcggttccgtggtgtgcggttccatgagtgctttctttgcatatgtc
cttagcacggttcttagtgcttactatgctcaggattacaagtacatgcgtcaggagatt
aggaaatattgctacctcatgatcggtgtttcatctgcagctttgctcttcaacactgtg
cagcatctcttctgggatgtggtaggggaaaatttaaccaaacgtgtccgggagaagatg
cttgcatctgttctccgaaacgagatcgcatggttcgacagagaggagaacgccagtgct
aggattgcacgtaggctgacatcggatgctcacaatgtgcgatctgcaatcggagatcgt
atatcagtcatcgtgcagaatgtctcactgttgcttgtggccttcactgctggattcatc
cttgaatggcggctagccatggttcttgtctctgtttttccgatcgtggtcgttgcgaca
gttcttcagaaaatgttcataacgggcttctcaggggaccttgaaggagctcacaccaag
gccacacagatcgccggcgaggccgtggccaacatccggacagttgcagctttcaattca
gaagcaaagatcacccaactattcgcaaccaacttgcaggctccgctcgttcgctgcttt
tggaagggtcaagtagcagggagtggattcggtgtcgctcagttgttcttgtatgcttcg
tatgccctcggtttatggtacgcttcatggctcgtgaagcatgggatatcagatttctcc
aagacaattcgcgtgttcatgatcctcatggtctcagctaacggtgtcgccgaggccctc
tccctcgcacctgacttcatcaagggcagctgcgccctgcgatccgtgttcgagctgatc
gaccgccaaaccgaaattgagcctgatgatcccgacgccactcctctacctggctgcatc
cgtggcgaggtcgagctcaagcacgtagactttgcttatccatcctgcccgaacttgcct
gtgctctgcgatctcacactgcgtgcccccgcaggaaagatgctcgctcttgtcggcccg
agcggctgcgggaagagctccgtcatttcgttggtccaaaggttctacgagccgacatcg
ggccgcgtgctcatcgacgggaaggacataaaaaagtacaacttgaaggcgctgcgtcag
gcgatcgcggtggtgcctcaggagccatgcttgtttgcttcaaccatctttgagaacatc
gcatacgggagggaggcagcgacggaggcagaagtggtggaggctgcgacgctggccaac
gcgcacaagttcatatcagcattgcccgacgggtacaggacatggctcggggaacgaggg
gtgcagctatcgggcggacagaggcagagagtagccgtggcacgggcactaatgaagaag
gcgccgatactgctactggacgaggcaacgagcgcactggacgcagagtccgagaggagc
gtgcaggatgcactcgagcggtcgggaacggaacgaaccaccatcgcggtggcgcaccgc
cttgcgtcggtaaggaacgctcacgtgatcgcagtgatcgacgatgggaaggtggtggag
caaggaacgcactcgcacctgctcaaacaccatcccgacgggagctacgcccgaatgctg
cagctgcagcgcttcgccaatggagctgcgactgcaaatggcgcgtcgtcgctgggaccg
tcgacgagtgccagagaagctacaagatag
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integrated database retrieval system
