Zingiber officinale (ginger): 121970545
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Entry
121970545 CDS
T08725
Name
(RefSeq) beta-galactosidase 8-like isoform X1
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00052
Galactose metabolism
zof00511
Other glycan degradation
zof00531
Glycosaminoglycan degradation
zof00600
Sphingolipid metabolism
zof00604
Glycosphingolipid biosynthesis - ganglio series
zof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
121970545
09103 Lipid metabolism
00600 Sphingolipid metabolism
121970545
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
121970545
00604 Glycosphingolipid biosynthesis - ganglio series
121970545
00511 Other glycan degradation
121970545
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
121970545
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
121970545
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121970545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
121970545
NCBI-ProteinID:
XP_042377262
LinkDB
All DBs
Position
1B:complement(102687761..102750436)
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AA seq
706 aa
AA seq
DB search
MSIKRYYHSELSKGSTLGGDGSAMVVLKSNLELPLFIFVVIVTTGIVSSSSSLSGLSSSG
CAFHRRYGSSAACNRRFWISDDMFWKDGNPFRIIGGDVHYFRILPQYWRDRLLRAKALGL
NTIQTYVPWNLHEPEPKRWVFEGIADIESYLKLAQELGFLVMLRPGPYICAEWDFGGFPA
WLLAIEPPLKLRSSDKTFLAYVQRWWDVLLPKIAPLLYENGGPIIMVQIENEFGSYGYDK
KYLHYLVALARKYLGNETILYTTDGGSRDTLDNGTIPEKGVFSAVDFSTGEDPWPIFQLQ
KEYNAPGKSPPLSAEFYTGWLTHWGEKIAETDANYTAAALEKILSRNGSVVLYMAHGGTN
FGFYSGANTGQNESDYKADLTSYDYDAPIKESGDVGNPKYEALRRVIQKYSGVVLPRAPP
DNKKLGYGLVDLRKIASFNEVLNDIYDSTMVVKSEHPMSMETVGQMFGFMLYASKLPPRK
RSSILKILKVHDRAQVFVSCGLDKAGGHPIYIGVIERWSNRELLIPKISCSSNSSLLILV
ENLGRLNYGQYISDKKGILSNVFIDGTALHGWQMFPIPLDRFSNFTTVNPIKQISDLMTE
NISTGPGIYEGHVTINSAKQIKDTFISFRGWNKGIAFVNDFNIGRFWPSLGPQCTLYVPA
PLLREGENIVVILELHAPNPDFTINLVKKPDFTCGTKSRRNDNYRE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattaaaaggtactaccacagtgagttgtcgaagggatcaacgctcggcggagac
ggtagcgcgatggtggtgctgaagagtaacctcgagttaccgctctttatcttcgtcgtc
attgtcaccaccggaatcgtctcctcctcgtcctccttgtccggcctctcctcctccggt
tgcgctttccaccgtcgctatggctcttcggcagcctgcaatcggaggttttggatttca
gatgacatgttttggaaggatggcaatccttttaggatcataggcggtgatgtgcactac
ttccgtatcctgccgcagtattggagagatagattgttgcgtgctaaagcccttggcctt
aacacaatccagacatatgttccgtggaatttgcatgagccagagccaaaaagatgggta
tttgaaggtatagcagacattgaatcctacttgaagcttgctcaggagctaggttttctc
gttatgcttcgacctgggccatatatatgtgcagagtgggactttggaggtttccctgct
tggttacttgcaatagaaccacctcttaaactcagatcatcagataagacattccttgcc
tatgtacagagatggtgggatgttcttcttcctaaaatagctcccctattatatgagaat
ggaggtcccatcattatggttcagattgaaaatgagtttggatcatacggttacgacaag
aaatatcttcattatttagttgctttggctagaaagtaccttgggaatgagactatactg
tatactacagatggcggttctagagacactctagataatggaacaatccccgagaaaggt
gttttttcagcggtcgacttttcaactggtgaggatccatggcctatatttcagttgcaa
aaggaatataatgcccctggaaaatcacctcctctctcagcggaattctatacaggatgg
ctcacccactggggagagaagattgcagaaaccgatgccaattatactgctgctgcttta
gaaaagattttatctaggaatggttctgttgtactctatatggctcatggtggaactaat
tttggattttacagtggtgcaaacactggtcagaatgaatctgattataaggcagatctt
acgtcctacgattatgatgctccaatcaaggagtccggtgacgtgggcaatccaaaatat
gaagcattaaggagagttattcagaagtacagtggagtagttctgcctcgtgcccctcct
gataataaaaaattaggatatggcctagttgatctccgcaagattgcctcttttaatgag
gttctcaatgacatatatgattcaaccatggtagtcaaaagtgaacatcctatgtcgatg
gagacagttggccagatgtttggatttatgttgtatgcgtctaaattacctccgaggaaa
agaagtagcatcctaaaaattctgaaggtgcacgatagagcccaagtttttgtttcatgt
ggtttggacaaagctggaggccatcctatatacattggtgtaattgaaagatggtcgaat
agggaacttctgattcccaaaatctcttgttcctcaaatagcagcttacttattctggtg
gaaaacttgggtcgtctaaattatggtcaatacatctctgataagaagggaatactgtct
aatgttttcatagatggcactgcccttcatggatggcagatgtttccaattccactagat
agatttagcaattttacgactgtcaacccgatcaagcaaatttctgatttgatgacagag
aacatttccactggacctggaatttatgaaggccatgtcaccatcaattcagcaaaacaa
atcaaagatacatttatttctttccgtggttggaacaagggaattgcttttgtgaatgac
tttaatattggaagattctggccttcacttggaccgcaatgcaccctttatgttcctgca
ccattacttcgagaaggagaaaatattgtggtcatcttagagttacatgcaccaaatcct
gatttcacaatcaacttggtgaagaaaccagacttcacttgtggaaccaagagtagaagg
aatgataattatcgagaataa
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