Zingiber officinale (ginger): 121970914
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Entry
121970914 CDS
T08725
Name
(RefSeq) lycopene beta cyclase, chloroplastic/chromoplastic-like
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00906
Carotenoid biosynthesis
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
Module
zof_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
121970914
Enzymes [BR:
zof01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
121970914
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Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
DAO
FAD_oxidored
HI0933_like
Pyr_redox
Thi4
NAD_binding_8
Pyr_redox_3
FAD_binding_3
FAD_binding_2
GIDA
Trp_halogenase
3HCDH_N
Motif
Other DBs
NCBI-GeneID:
121970914
NCBI-ProteinID:
XP_042377850
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Position
4A:complement(123558205..123560284)
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AA seq
501 aa
AA seq
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MDALLRTHSRLELLDLSHGVGGRHGLSSLHKLQNSLICSFSRKGHRRWGFAKASSSALLE
LVPETKKETLEFDLPFYDPSKDLTLDLAVVGGGPAGLAVAQQVSQAGLSVCSIDPSPKLI
WPNNYGVWVDEFEAMDLLDCLDATWSSAVVYVDEVEKKSLGRPYGRVNRKQLKSKMMQRC
ISNGVQFHQAKVIKVIHEENKSLLICNDGVTIQAAVVLDATGFSRCLVQYDKPYNPGYQV
AYGILAEVEEHPFDVDKMVFMDWRDSHLKEGSQLKDKNDKIPTFLYAMPFSPNKIFLEET
SLVARPGLQMHDIQERMASRLRHLGIKVKVIEEDERCVIPMGGPLPVLPQRVIGIGGTAG
MVHPSTGYMVARTLAAAPIVAESIVQFLGSDRRLTGDQLSSQVWKNLWPIERRRQREFFC
FGMDILLKLDLEGTRRFFDAFFDLEPHYWHGFLSSRLFLPELVFFGLALFSHASNTSRLE
IMAKGTLPLVNMINNLARDRK
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgcttcttagaactcacagcaggcttgagttgctagacctcagtcatggggtc
ggcggaaggcatggcctctcgtctttacacaagcttcagaacagcttgatatgcagcttc
agtaggaaaggtcacaggagatggggttttgctaaagctagcagcagtgcactccttgaa
cttgttccagaaaccaaaaaagagactctcgaattcgatctccctttttatgacccgtct
aaagatctcaccttggacctcgctgtagttggaggaggtcctgcggggctagctgtcgcc
cagcaggtgtctcaggcaggcctttctgtctgttctatcgacccatcacctaagctgata
tggccgaataactatggtgtttgggtggacgagtttgaagctatggatctacttgattgt
cttgatgccacttggtctagtgctgtggtctatgttgatgaagtggagaagaagtctctc
ggtcggccttacggtcgggtgaaccgcaagcaactcaagtcgaagatgatgcagagatgc
atatctaatggtgtgcagtttcatcaagctaaggtcattaaggtcatccacgaagagaac
aaatcattgttgatttgcaatgatggagtcacaattcaagcagctgtggtgcttgatgct
actggtttctccagatgcctagtccagtatgataagccttacaatccaggttaccaggtg
gcttacggaatcctggctgaagtcgaagaacacccttttgatgtggataagatggttttc
atggattggagagattcacacctcaaagagggctcacagttgaaagataagaatgacaag
attccgacgtttctgtatgccatgcctttctcaccaaacaaaattttcctggaagaaact
tcactagtcgcccgtcctggtctgcagatgcatgacatacaggagaggatggcctcaaga
ttgaggcacctgggcataaaagtgaaagtcattgaagaggacgagaggtgtgtgattcca
atgggcggtccactacctgtgctcccacaaagggtcattggaatagggggaactgcaggt
atggttcatccatccactgggtacatggttgctaggacacttgctgctgctcctatagtt
gcggaatcaattgttcagttccttggttctgaccgccgcctcactggcgatcaactatcg
tcgcaagtttggaagaacctctggccaattgaaagaagaagacagagggagtttttctgc
tttggcatggatatcctacttaaactcgacttggaaggtacaaggagattttttgatgca
ttttttgatttggaacctcactactggcatggatttctgtcatcaagattgtttcttcca
gagcttgtgttctttgggcttgctttgttctcccatgcttcaaatacttctaggttagaa
atcatggcaaaaggtactctccctcttgtgaatatgattaataacttggcacgggataga
aaatag
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