Zingiber officinale (ginger): 121970920
Help
Entry
121970920 CDS
T08725
Name
(RefSeq) tryptophan synthase beta chain 2-like isoform X1
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00260
Glycine, serine and threonine metabolism
zof00400
Phenylalanine, tyrosine and tryptophan biosynthesis
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
zof01230
Biosynthesis of amino acids
Module
zof_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
121970920
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
121970920
Enzymes [BR:
zof01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
121970920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-GeneID:
121970920
NCBI-ProteinID:
XP_042377862
LinkDB
All DBs
Position
4A:123651572..123654011
Genome browser
AA seq
506 aa
AA seq
DB search
MASAAAAAAANRHPQGSSSTTAFCSTTAKSLLGLAPSGRFGVHKKLSHGHGLRIRATSGD
GNKVEVPRQWYNLIADLPVKPPPALHPKTHKPLKQEDLSPLFPDELIKQEVSEERFIPIP
EEVIDIYRLWRPTPLIRAKRLEKLLETPARIYYKYEGTSPAGSHKPNTAVPQAWYNAQQG
VRNVVTETGAGQWGSSLAFACSLFGLNCEVWQVRASYDQKPYRKLMMQTWGARVHPSPST
VTNAGRKILEDDPMSPGSLGIAISEAVEVAAAHEDTKYCLGSVLNHVLLHQTIIGEECLE
QLAAIGETPDVIIGCTGGGSNFGGLTFPFIREKLKGKLNPLIRAVEPAACPSLTKGIYAY
DYGDTVGMTPLMKMHTLGHDFVPDPIHAGGLRYHGMAPLVSHVYEMGFMEAISLPQTECF
RGALLFARTEGLIPAPEPTHAIAAAIREALHCKETGEKKVILIAMCGHGHFDLASYEKYL
EGNMVDLDFSSEKAQASLAAIPQIVP
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgccgcagccgccgccgccgccaaccgtcaccctcaaggatcttcctcgaca
acagcgttttgctcaactactgcgaaatcactgcttggcttggcaccaagcgggaggttt
ggagtccataagaagctctctcacggccatggactgagaatccgagcaacttccggcgac
ggcaacaaggtggaggtaccaaggcagtggtacaacctcatcgctgatctccctgtaaaa
cctcctcctgctctgcatccgaagacacacaagccacttaaacaagaagatctatcgccc
cttttcccagatgagttgatcaagcaagaggtcagcgaggagaggttcatccctataccg
gaggaagtcatcgacatctacaggctctggcggccaacccctcttatcagagccaagaga
ctagagaaactgcttgaaacacctgcaaggatctactataagtatgagggcacaagccct
gcaggatctcacaagcccaatactgcagtcccacaagcatggtacaatgctcagcaggga
gtgaggaacgtcgtgaccgaaaccggtgcaggccagtggggcagctctttggcttttgct
tgtagcctattcggtctcaattgtgaagtttggcaggttcgcgcttcttatgatcagaaa
ccttaccggaaactcatgatgcaaacatggggagctagagttcatccgtcaccctctaca
gtcaccaatgctggccgaaaaatccttgaggatgatcctatgagccccggcagtctaggg
attgcaatctctgaggcagttgaggttgcagctgctcatgaggacaccaagtattgtttg
gggagtgttctaaaccatgtgttgcttcaccaaactatcatcggggaggaatgtcttgag
caactggcagcgatcggtgaaacgccggacgtgatcataggctgcaccggcggcgggtct
aacttcggcgggttaacgtttcctttcattcgggagaagctgaaaggaaaattgaacccc
ctgataagagctgtagagccagcagcttgtccttctctgaccaaaggcatttatgcctat
gattatggcgacactgtcgggatgacaccattgatgaagatgcatactctcggtcatgac
tttgtccctgatccaattcacgcaggcggtttgcgctaccatggaatggcaccactagtt
tctcatgtttatgagatgggattcatggaagctatatcacttcctcaaactgaatgcttt
cgcggtgccttgctgtttgcacgaacagagggtctaattccggctccagagccaactcac
gccattgctgctgcaattagagaagcactgcactgtaaagagacgggcgaaaagaaagtc
atactgatagcaatgtgtgggcatggacattttgatctggcttcctatgagaagtatttg
gaaggcaacatggttgatctcgacttctccagtgaaaaggcacaagcatcgttggctgcc
atccctcaaattgttccctga
DBGET
integrated database retrieval system
