Zingiber officinale (ginger): 121974388
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Entry
121974388 CDS
T08725
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00040
Pentose and glucuronate interconversions
zof01100
Metabolic pathways
Module
zof_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
121974388
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
121974388
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Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Beta_helix
Motif
Other DBs
NCBI-GeneID:
121974388
NCBI-ProteinID:
XP_042381360
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Position
1B:complement(114911125..114913704)
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AA seq
394 aa
AA seq
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MKLLLLLCLMDCFLAVAQTSSGTFNVLNYGAMADGISDDNKAFMAAWKAACSFTGGVKLL
IPKGTYLVGPVKFDGPCRNVSSITVSMEGYMKASTNLSKYVSGDDWIQFGWVHHLTLTGG
GTFDGQGALSWPFNECSKTEKCKVLPSSIKFVYTEHTVMKSIKSLNSKFFHIVLLGCKNF
WGSNIVAQAPSDSPNTDGFHIERSLGVNIYNSVITTGDDCISIGQSNEQVVISGITCGPG
HGISVGSLGRYENEGDVKGLLIKDCTLSGTANGLRIKTWKNSPGKSSVSNLTFQNIILNS
VANPIIIDQAYCPYAVCSSKVPSLVSIRDIIFSDIRGTSTTPVAVTLKCSSGVPCENVNL
HDVHLRYVGGSPTIAECLNVQATYSGTQLPLPCN
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcctgcttttgctgtgcttgatggattgcttcctcgccgtcgcccaaaccagc
tctggtaccttcaatgtcctcaattacggcgccatggccgacggcatcagtgatgacaac
aaggcattcatggcagcatggaaagcagcatgctcctttactggtggtgtcaagcttctg
atacccaaaggaacttaccttgttggccctgttaaatttgatggcccctgcagaaatgtc
agctccattactgtatccatggagggatacatgaaagcctccacgaatttgagtaaatat
gtcagcggcgatgattggatacagtttggatgggtgcatcatctgactttaacaggaggg
ggcacctttgatggccaaggagctctctcctggcctttcaatgagtgctccaagacagaa
aaatgcaaagttctaccttcatcgatcaagtttgtttacactgaacatactgtgatgaag
agcataaagtcattgaacagcaagttcttccacattgttttgcttggctgcaagaacttt
tggggaagcaatattgtggctcaggctccttccgacagccctaacacagatgggtttcac
atcgagaggagcttgggagtaaacatttataactcggtgatcacgaccggggatgattgc
atctccatcggacaaagtaatgagcaggtagtgatcagtggcatcacttgtggcccaggc
catggaatcagtgtcggaagcctaggaaggtacgagaacgaaggagacgtcaaggggctc
ttgatcaaagactgcactctatcaggtacagcaaatggtttgagaatcaagacatggaag
aactctccgggaaaaagttcagtaagtaacttgaccttccagaacatcatcctcaatagt
gtcgcaaacccgatcatcattgaccaggcatactgcccctacgccgtctgctcatccaag
gtgccatccttagtgagcattagggacatcatctttagtgatatcagggggacatcaacg
acgccggtggcggtcaccctcaaatgcagttcaggggtgccatgtgaaaatgtcaatctc
cacgacgtccatctaaggtacgtcggtggaagtccaacgatcgccgagtgtttgaatgtt
caagcgacatactcaggcacccaactgcctctgccatgcaattag
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