KEGG   Zingiber officinale (ginger): 121975016
Entry
121975016         CDS       T08725                                 
Name
(RefSeq) lysine-specific demethylase JMJ30-like isoform X1
  KO
K24444  [histone H3]-dimethyl/trimethyl-L-lysine36 demethylase [EC:1.14.11.27 1.14.11.-]
Organism
zof  Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:zof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:zof03036]
    121975016
Enzymes [BR:zof01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     121975016
Chromosome and associated proteins [BR:zof03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    121975016
SSDB
Motif
Pfam: Cupin_8 JmjC_2 JmjC PknG_TPR Cupin_2
Other DBs
NCBI-GeneID: 121975016
NCBI-ProteinID: XP_042382296
LinkDB
Position
4B:46298490..46312270
AA seq 398 aa
MAIDEERRAALMRQITEEGGFAYVSSAEKAAGGDLRAAEAAREMAWEQLHSGPWYEVVPA
WRDAYAMACFHVAELRAGAGDRREALRALDMGLIMGGPLLRRDIDAAVERIMAEKGVEDA
AVDDGCADMWIKGISANGDLAEALRILPHRSLSCKKVEKQLSLSLETFICDYFLRDSPVI
ISGCIDHWPARTKWKDMEYLKRVAGDRTIPVEVGKNYLCSEWKQQLITFSQFLERAQSTN
CSSNLTYLAQHPLFDQIRELRDDIMIPDYCFAGGGELRSLNAWFGPLGTVTPLHHDPHHN
IFAQVVGRKYVRLYPPSSSEHLYPHTETMLCNSSQVDLDNIDLEEFPVTADLDFSDCVLE
EGEMLYIPPKWWHYVRSLSTSFSVSFWWSATTDSCRVT
NT seq 1197 nt   +upstreamnt  +downstreamnt
atggcgatcgacgaagagcgccgggctgcactgatgaggcagatcaccgaggagggtggc
ttcgcctacgtcagctcggcggagaaggcggccggcggagacctccgggctgcagaggct
gcgcgggagatggcgtgggagcagctccactcagggccatggtatgaggtcgttcccgct
tggcgagacgcctatgcgatggcctgcttccacgtggcggagctccgggccggcgctggc
gaccgacgggaagccctccgcgccctcgacatgggtcttattatgggcggcccgctgctc
cgtcgcgacatcgacgctgccgtggagaggatcatggcggagaagggagtggaggacgcg
gccgtagacgatggttgtgctgacatgtggataaagggaatatccgcaaacggagacctg
gcagaggcactacgcatcctgccacacagatcactatcgtgtaagaaagttgagaaacaa
ttgtctctctctttggagacatttatatgtgattattttttacgggattctccagttata
atcagtggatgcattgatcattggcctgcacgaacaaagtggaaggacatggaatatcta
aagagggtagcaggagatcgaactatccctgtcgaggtgggaaagaactatctatgttct
gaatggaagcaacagctgattaccttttctcaattccttgaaagggcacaatcaactaat
tgctcttccaacttaacatacctagctcagcatcctttgtttgatcagataagggagctc
cgtgatgacataatgattccagactactgctttgctggtggcggcgagcttcgttctctc
aatgcctggtttggtccacttggtacagttacaccactgcaccatgatcctcatcataat
atttttgctcaggtagttggccgaaaatatgtaagactctatccaccatcatcatcggag
cacttatatccccatacggagaccatgctttgcaattccagtcaggtagatcttgacaac
attgatttagaagaatttccagtgacggccgacttggatttttccgactgtgtcttggaa
gaaggtgaaatgctttacattccacccaaatggtggcactatgtgagatcactttcaaca
agcttctctgtcagtttttggtggagtgcaacaactgattcttgtagagtgacatag

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