Zingiber officinale (ginger): 121975424
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Entry
121975424 CDS
T08725
Name
(RefSeq) geranylgeranyl pyrophosphate synthase 7, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00900
Terpenoid backbone biosynthesis
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
Module
zof_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
121975424
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
zof01006
]
121975424
Enzymes [BR:
zof01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
121975424
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
121975424
2.5.1.29 geranylgeranyl diphosphate synthase
121975424
Prenyltransferases [BR:
zof01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
121975424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-GeneID:
121975424
NCBI-ProteinID:
XP_042382993
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All DBs
Position
4B:complement(87602994..87604176)
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AA seq
345 aa
AA seq
DB search
MAYAFVCFPAFAQVMTSCSSPSWGVAARPRRLLPAVRCASSAPEAVAHEADLFDLKRYMT
EKARRVDDALDRALPLRHPERLLAAMRYSLLAPGKRVRPVLTLAACELVGGEESTAMPFA
CAVEMLHVMSLVHDDLPCIDNDELRRGRPSNHVVFGEGVAVMAGDALHCFAFAHAAEATA
GVPPMWVLRAVAELGKATGTEGLLAGQVVDIECEGKEVGLEVLEYIHLHKTARLLEAAVA
CGGIIGGAEEEEVERLRRYGRTVGLLFQVVDDVLDVTRTSEELGKTAGKDLAKGKATYPK
LMGLEKARLQAEELAAKAEEELQGFDRNRARPLRHLARYIAHRHN
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggcttacgcctttgtttgcttcccggcttttgctcaggtgatgacttcttgctcgtct
ccgtcatggggcgtcgccgctcgcccacgccgcctcctgccggcagtcagatgcgcttcc
tctgctcctgaggcggtggctcatgaggccgacctgttcgacctgaagcggtacatgacc
gagaaagcccggcgcgtggacgacgccctcgaccgtgcgctgccgctccgacacccggag
cggctcctcgccgccatgcgctactccctcctggcccccggaaagcgcgtccgcccggtg
ctgacgctggccgcctgcgagctggtcggcggagaggaatccaccgccatgcccttcgcc
tgcgccgtcgagatgctccacgtcatgtcgctcgtccacgacgaccttccctgcatcgac
aacgacgagctccggcgcgggcgcccctccaaccacgtggtcttcggggagggcgtcgcc
gtgatggcgggcgatgctctgcactgcttcgccttcgcgcacgcggcggaggccacggcg
ggggtaccgccgatgtgggtcctccgggcggtggcggagctgggaaaggcgacggggacg
gaggggttgctggcggggcaggtcgtggacatcgagtgcgagggcaaggaggtgggactg
gaggtgctggagtacatccacctgcacaagacggcgaggctgctggaggccgcggtggcg
tgcgggggaatcattggcggcgcggaggaggaagaggtggagaggctgaggaggtacggg
cggacggtgggtcttctgttccaggtggtggacgacgtgctggacgtgacgaggacgtcg
gaggagctggggaagacggccgggaaggacttggcgaaagggaaggcgacgtacccgaag
ctgatggggttggagaaggcgcgattacaggcggaggagctggcggcgaaggcggaggag
gaactgcaggggttcgacaggaacagagcgcggccgctacgccacctcgcccgctacatc
gcccaccgccataactga
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