Zingiber officinale (ginger): 121976447
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Entry
121976447 CDS
T08725
Name
(RefSeq) DNA polymerase delta small subunit-like isoform X1
KO
K02328
DNA polymerase delta subunit 2
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03030
DNA replication
zof03410
Base excision repair
zof03420
Nucleotide excision repair
zof03430
Mismatch repair
zof03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121976447
03410 Base excision repair
121976447
03420 Nucleotide excision repair
121976447
03430 Mismatch repair
121976447
03440 Homologous recombination
121976447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zof03032
]
121976447
03400 DNA repair and recombination proteins [BR:
zof03400
]
121976447
DNA replication proteins [BR:
zof03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
121976447
DNA repair and recombination proteins [BR:
zof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
121976447
MMR (mismatch excision repair)
DNA polymerase delta complex
121976447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
DNA_pol_D_N
Motif
Other DBs
NCBI-GeneID:
121976447
NCBI-ProteinID:
XP_042384542
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All DBs
Position
4B:124681950..124687628
Genome browser
AA seq
491 aa
AA seq
DB search
MELRDIAPFPTSCFPSSLFPTMRADVEMNEESSKLFEREQAIYNNLDERFEIHKEKYKGQ
QYSHIYFSRLHHMRNLLYSLVPNWKPNLPVKTILGLEEGKECIIVGTIYKHMKLKPSILD
EYSKERSKVPLVKPHNFVHPDDHLILEDESGRVTLTGSLLDPSAFVTGIVVALHGKETSE
GDFFVEDMLEAGIPPQTELPLSSIQCIKNVTYVSPLQLGILGCLIILAGEDKYVVFVSGL
SIGSSIFNPLQFQLLVDHITGHLGDRNEQSIASQIVHVVVAGNSVQIPQVLLSGHTIAPR
DQSTLTEPIKELDILLNQLVAAMPVDIMPGPNDPANFSLPQQPLNRCLFPGASAYNTFMS
CTNPHQFELDDILFLGTSGQNIDDLFKYSEAKNRLEFLEKTLKWRHLVPTAPNTVGCYPF
TDRDPFLIESCPHVYFIGNQDKYETTLVQGPEKQLVRLICIPKFCETGNAVVLNLRNLEC
HTLSFPTSLDL
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggaattacgggatatagctccattcccgacttcctgctttccctcttctctttttccc
accatgagagcagacgtcgagatgaacgaagaaagttctaagcttttcgagagggagcaa
gctatatacaataatctggacgaaaggtttgagatccacaaggagaagtacaaagggcag
cagtacagccacatatacttcagtcggctccaccacatgaggaatcttctttactcgctc
gttcccaattggaagcccaaccttcccgttaaaacaattttgggacttgaagaagggaaa
gagtgcataattgttggcacgatatacaaacacatgaaacttaagccttctatacttgat
gagtattccaaggagagatctaaagttcctcttgtgaagcctcacaattttgtgcaccct
gatgaccatcttattttggaagatgaaagtggtagggttacacttacgggtagtttgctt
gacccttctgcttttgtaacaggtattgttgttgcccttcatgggaaggaaactagtgaa
ggtgatttttttgttgaagatatgctcgaagctgggatacctcctcaaactgaactgccg
cttagctcaattcagtgtatcaagaacgtgacttatgtttcacctttgcaactcgggatc
ttaggttgtctcatcattcttgcaggagaagacaagtatgttgtttttgtatctggattg
agtattggaagcagcatatttaatccacttcaattccaacttcttgttgaccatattacg
ggtcatttaggtgatagaaatgaacaaagcattgcatcgcaaatagtccacgttgttgtt
gctggaaattcagtgcaaattccacaagtacttcttagtggtcatacaattgctcccagg
gatcagtctaccttaacagaaccaataaaggagctagatattttactgaatcagcttgtt
gcagctatgcctgttgatataatgccaggacccaatgatccggcaaacttttccttacct
caacagcctctaaacagatgcttgtttcctggagcatctgcatataacacatttatgtca
tgcacaaatcctcatcagtttgagttggatgacattctgtttcttggaacatctggccag
aatatagatgatctgttcaaatattctgaggctaaaaacagacttgaatttttggagaag
acattgaaatggaggcaccttgtaccgacagctccaaacactgttggatgttatcctttc
accgatagagatcctttcctcattgaaagttgtccacatgtgtactttattggtaatcag
gataaatacgaaaccacattagtacaagggcctgagaagcagttagtgaggctcatttgt
atcccaaaattttgtgagactggcaatgctgttgtgcttaatctgaggaatctagagtgc
cacaccctcagtttcccaactagcttggatttgtaa
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