Zingiber officinale (ginger): 121993239
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Entry
121993239 CDS
T08725
Name
(RefSeq) biotin carboxylase 2, chloroplastic-like
KO
K01961
acetyl-CoA carboxylase, biotin carboxylase subunit [EC:
6.4.1.2
6.3.4.14
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00061
Fatty acid biosynthesis
zof00620
Pyruvate metabolism
zof00640
Propanoate metabolism
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
zof01200
Carbon metabolism
zof01212
Fatty acid metabolism
Module
zof_M00082
Fatty acid biosynthesis, initiation
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
121993239
00640 Propanoate metabolism
121993239
09103 Lipid metabolism
00061 Fatty acid biosynthesis
121993239
Enzymes [BR:
zof01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.14 biotin carboxylase
121993239
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.2 acetyl-CoA carboxylase
121993239
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GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
ATP-grasp
Dala_Dala_lig_C
RimK
ATP-grasp_5
GARS_A
Motif
Other DBs
NCBI-GeneID:
121993239
NCBI-ProteinID:
XP_042403887
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Position
6B:complement(95232798..95282119)
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AA seq
535 aa
AA seq
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MDSILASKPAFCPPGLFFQPAGGIKGSQFNFNVGHVANFCKVCYPRRPSSYVAKRSRNDG
RVLNEICRDEKILVANRGEIAVRVIRTAHEMGIPCVAVHSTIDRDALHVRLADDAVCIGE
APSSQSYLHIQNVLSAAVSRGCTMLHPGYGFLAENARFVDMCRGHGVNFIGPNPDSIRVM
GDKSTARETMKKAGVPTVPGSDGLLQSTEEAVKLAHEIGFPVMIKATAGGGGRGMRLAKE
PDEFVKLLQQAKSEAAAAFGNDGVYLEKYIQNPRHIEFQVLADKYGNVVHFGERDCSIQR
RNQKLLEEAPSPALTSELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRI
QVEHPVTEMISSTDLIEEQIRVALGERLTHKQEDIVLRGHSIECRINAEDAFKGFRPGPG
KITSYLPSGGPFVRMDSHVYPGYMVPPSYDSLLGKLIVWAPTRERAIERMKRALSDTIIT
GVPTTIEYHKLILDIEDFRNGKVDTAFIPKHENELVAPKKVILSTAEKELSVSNN
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggactctattctcgccagcaagcctgcgttttgtcctcctggactgttctttcaacct
gctggaggaataaaaggatcacaatttaactttaatgtgggacatgttgccaatttctgc
aaagtttgttatcctagaagaccatcatcttatgtggccaagagatctagaaatgatgga
agagtgcttaatgaaatttgccgggatgaaaagattcttgtggccaatagaggagaaatt
gcagtcagagtgatccgaacagcacatgaaatgggtataccttgtgtagctgttcactct
actattgatcgggatgctctacatgtgcggcttgcagatgatgcagtctgcattggtgaa
gctcccagtagtcaatcgtatttgcacattcaaaatgttttatctgctgctgttagtcgt
gggtgtacgatgttgcatcctggttatggtttcttagctgagaatgctcgttttgttgat
atgtgcagagggcatggagtcaattttattggacccaatccagacagcattcgtgtaatg
ggtgacaaatctacagctagagaaacaatgaagaaagctggtgttcctactgtaccagga
agtgatggacttttgcagtcaacagaggaggctgtgaagcttgcccatgaaattggtttt
cctgtcatgatcaaggcaactgctggtggaggagggcgcggaatgagattagctaaagaa
cctgatgagtttgtgaagttgttacagcaagctaagagtgaggcagcagctgcatttgga
aatgatggagtttatttggagaaatatatccaaaatccaaggcacattgaatttcaggtt
ctagctgacaaatatggtaatgttgtccatttcggggagcgtgattgtagcattcagagg
agaaaccagaaacttctggaggaagctccttcacctgctttgacttcagaactacgtaaa
gctatgggtgatgcagctgtagcagctgctgcatctataggttatattggtgtcggaact
gttgaatttctcttggacgaaagaggttctttctatttcatggagatgaacaccaggata
caggtagaacatcctgtcacagaaatgatttcttcaactgacttgattgaggaacaaata
cgtgtggctcttggagaaaggttgacccacaaacaggaagatattgttcttagagggcat
tcaattgagtgccgcattaatgcagaagatgcttttaaaggatttcgtcctggacctggg
aaaatcacatcatacttgccatctggaggaccatttgtgagaatggatagtcatgtatac
ccaggttacatggttcccccaagctacgactccctacttgggaagctcattgtttgggcg
ccaaccagggagagagcaatagaacgaatgaaaagagccctgagtgacaccattatcaca
ggagtacccaccactatcgagtaccataagttgatccttgatattgaggactttagaaat
ggaaaagtagacactgcgttcataccaaagcatgagaatgagttggttgcgcccaagaag
gtgatcctgtctacagcagaaaaagagctttctgtatcaaacaactaa
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