Zingiber officinale (ginger): 122002311
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Entry
122002311 CDS
T08725
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1B-like
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00270
Cysteine and methionine metabolism
zof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
122002311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122002311
03032 DNA replication proteins [BR:
zof03032
]
122002311
03036 Chromosome and associated proteins [BR:
zof03036
]
122002311
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
zof02048
]
122002311
Enzymes [BR:
zof01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
122002311
Transcription factors [BR:
zof03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
122002311
DNA replication proteins [BR:
zof03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
122002311
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
122002311
Prokaryotic defense system [BR:
zof02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
122002311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNMT1-RFD
DNA_methylase
BAH
Motif
Other DBs
NCBI-GeneID:
122002311
NCBI-ProteinID:
XP_042413373
LinkDB
All DBs
Position
7A:complement(122808131..122819436)
Genome browser
AA seq
1532 aa
AA seq
DB search
MARNPGGSNSTGMTRSGKRRSSKRKVTDNAESATAVECGKHSSNLENDNEIDACKRPRRA
AACSNFKERSVRISDKSSVLETKKIQVEENEEVAVELTRLGAEDLPPCRKLVDFTIHDAD
GNAQPFEMSEIDDCFITALVLPSDDNLGKERDRGIKCEGFGRIECWSISGYDEGSPVIWV
STEIADYECAKPAGSYKKFYDLFYEKACICVHVYQKLAKTVSGNSTLSLEELLASVIRSM
SGTKNFPAGSNCRDFVISLGEFIYNQLIGLDESSTNNNVNWATMPTLIALRDECGSRSES
KNFPLRVSNQNLRIKEGEVLGSTEDEDEKLARLLQEEENWKAMRQQKSHRAATNTKKNIY
IKINEIEIANDYPLPAYYRPSNHEMDEYLFFESENNMSYSDLPRRILDNWALYNSDSRLI
SLELLPMKSCAEIDVTIFGSGQMREDDGSGFELDNDLGLSSSSRSNHADIEGVPIYLSAI
KEWMIEFGASMIFISIRTDVAWYRLGKPAKQYDPWHQPVLKTAKLAISIITLLKEQSRVS
KLSFADVIKKVSEFSKTHPAYISSNLSLVERYIVVHGQIILQQFAEYPDETIRKSAFIIG
LSENMEQRSHTKLIMKKKALLKKEENLNPCAAMGPTLSSRKVMRATTTRFINKIWGDYYL
NFFPEDSTNGDAHEPVEIEGELEDNEDDEVEEENALVLDQQPTKPHSTSHSSKLHKEIQW
EGKPNGKMDSGETLYRCAIVRGHVIEIGGAVTMEADVNDEPSLLFVEYMFEKHNGVKMAH
GRVLLKGSQTILGNAADERELFLSNDCMEVELGNIKESIVVDIRLRPWGHQYRKDYGNAD
KIDRAKAEENRRKGLPMEFYCKVLYSPERGGFFVLPHHSMGLGNGVCDSCKEKSLQKDDF
KLSSNSSFVYKRIEYTVQDFLYVRPQFFDSEEQEDLGTFKSGRNVGLKAYVVCQILEIPV
SKQHTLKSAKVKVRRFYRPEDISSEKAYSSDIREVYYSENVVSVPVDMIEGKCEVRKKID
VLSFGIPVLDDIFFCEYCYDPVKGTLKQLPANIKVSSLKIKEDQIAYRKKKGKEKCGDEF
SAKLTDVSRENHLATLDIFAGCGGLSAGLQHSGVSYTKWAIEYEEPAGEAFRYNHPEALM
FVDNCNVILRAIMEKYGDSDDCISTSEAADLAASLDEEKLKNLPKPGEVDFINGGPPCQG
FSGMNRFNRSTWSKVQCEMILAFLSFAEYFRPKFFLLENVRNFVSFNKGQTFRLTLASLL
AMGYQVRFGILEAGAYGVSQSRKRAFIWAASPEETLPEWPEPIHVFATPELKISMPRNGY
YTAVRSTAGGAPFRSITVRDTIGDLPPVANGAAKPTIDYGSEPISWFQKNIRSGMSALND
HISKEMNELNLIRCQRVPKRPGADWRDLPDEKVKLSTGQMVDLIPWCLPNTAKRHNQWKG
LFGRLDWDGNFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDSYQFSGNVQNK
HRQIGNAVPPPLAYALGRKLKEAVERKQSPSA
NT seq
4599 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaaatcctggaggttcgaattctacaggaatgacaaggagtggcaaacgaagg
tcatcaaaaaggaaagtaactgataatgctgaatctgctactgcagtggagtgtggaaaa
catagtagcaatcttgaaaatgataacgaaatagatgcttgcaagaggccaaggcgagct
gcagcatgctcaaactttaaagagagaagtgtcagaatatctgacaaatcctcagttctt
gaaacaaagaaaatacaagtggaggagaatgaggaagtggctgttgaactgactagactt
ggtgcagaagatctccccccatgtagaaagcttgttgatttcaccattcatgatgctgat
ggaaatgcacagccatttgaaatgtcagaaatagatgattgtttcatcactgcacttgtt
ctgccttcggatgacaatctgggaaaagagagagacaggggaataaaatgtgaaggattt
ggccggatagagtgttggtcaatttcaggttatgatgaaggttcaccagttatttgggtc
tcaacagaaattgcagactatgagtgtgcaaaaccagcaggcagttacaagaagttttat
gaccttttttatgagaaggcatgcatatgtgttcatgtttatcaaaagttggctaaaact
gttagtgggaactcaactttgagccttgaggagttgcttgcttcagtaatccgttctatg
agtggaaccaagaattttcctgctggatcaaattgtagagattttgtgatctctcttgga
gagtttatttacaaccagctaataggcctagatgagtcttctaccaacaacaatgttaat
tgggcaactatgccaactcttatcgctttaagagatgaatgtggaagtaggtcagaatca
aagaattttccattaagggtatcaaatcagaacttgaggattaaggaaggagaagtttta
ggttctactgaagatgaagatgagaaattggcaagacttttgcaggaagaggaaaattgg
aaggctatgaggcagcaaaaaagccatagagcagctacaaacactaaaaagaacatctac
ataaaaatcaatgagatagagattgctaatgattatccattgcctgcctattaccgacct
tccaaccatgaaatggatgaatacttattttttgagagtgagaacaatatgtcatattct
gatcttcctagaaggattcttgacaattgggctctctataattctgactcaaggctaatc
tctctggagcttctgccaatgaagtcatgtgcagaaattgatgtgactatttttggatct
ggtcaaatgagagaggatgatggtagtggatttgaattggataatgacctaggtctttct
tcttcaagccgttctaaccatgcagatattgaaggggttccaatctatcttagtgctatt
aaggagtggatgattgaatttggtgcttcaatgattttcatctctatccgaacagacgtt
gcctggtacaggttagggaaacctgcaaaacaatatgatccttggcatcaaccagtcctg
aaaacagccaagcttgctatttctataatcactttgttaaaagaacaaagcagggtttca
aaactttcctttgctgatgtaattaagaaagtgtcagaatttagcaaaactcatcctgca
tatatatcatccaacttatctttggttgagagatacattgttgtacatggacagattatt
cttcagcagtttgctgagtatcctgatgaaacaattaggaagtctgctttcataattgga
ctttctgagaatatggagcaaagaagccatacaaaactcataatgaagaaaaaagctctg
ttaaagaaggaagaaaacttgaatccttgtgcagcaatgggacctactttatccagcaga
aaagtaatgcgtgctacaacaacaagattcatcaataaaatttggggagactactacttg
aattttttccctgaggactctactaatggggatgcacatgagcctgtagaaattgaagga
gagctggaggacaatgaagatgatgaagtagaagaggagaatgcattggtgttggatcaa
caacccacaaagcctcattcaacctcacactcttctaagcttcataaggaaatccaatgg
gagggaaaacctaatgggaaaatggattctggggagactctttatcgttgtgcgattgtc
cgtggacatgttatagaaattggtggagcagtaactatggaagctgatgtaaatgatgag
ccatctttattgtttgtggaatacatgtttgagaaacataatggtgtcaaaatggctcat
ggaagggtgttgctcaaaggctcccagactatccttggaaatgcagctgatgagagagag
ttgttcctttcaaatgactgtatggaagttgaactagggaatattaaagaatccatagta
gttgatatccgtttacggccctggggacaccagtacagaaaggattatggcaatgctgat
aagatcgatagagcaaaagcagaggagaatagacggaaaggactgcctatggagttctat
tgcaaagtcttatatagccctgagaggggtggtttttttgttcttcctcatcacagtatg
ggccttggaaatggtgtttgtgactcttgcaaagaaaagtccttgcagaaagatgatttc
aaattgagttccaattctagctttgtctataagaggattgagtacactgttcaagatttt
ctttatgtcagacctcagttctttgacagtgaagaacaggaggatcttgggacttttaaa
tctggcagaaatgtaggactaaaggcctatgtagtgtgccaaattcttgaaattccagtg
tccaagcaacatacattaaaatcagcaaaggtgaaagtaagaaggttttatagaccagaa
gacatttcatcagaaaaagcctacagttctgacattagagaggtgtactatagtgaaaat
gtggtctctgtgcctgttgacatgattgaaggaaaatgtgaagttcggaagaagattgat
gttttaagttttggtatacctgtgcttgatgacatattcttctgtgaatattgttatgat
cctgttaaaggaactctcaaacagttacctgccaacataaaggtatcgtctttgaaaata
aaggaagaccaaattgcctatcgaaagaaaaagggcaaggagaagtgtggagatgaattt
tctgcaaaattgactgatgtgtctcgggaaaatcatttggcaactcttgatatttttgct
ggatgtggtggcttgtctgcaggacttcagcactctggtgtttcatatacaaaatgggcc
attgaatatgaagagcctgctggtgaagcatttcgctataatcatcctgaagccttgatg
tttgtagataattgcaatgttattctcagggctattatggagaaatatggagattcagat
gattgtatctcaacgtctgaggctgctgacttggctgcttcacttgatgaggagaagctt
aaaaatctaccaaagccaggcgaagtagatttcatcaatggagggcctccatgtcaggga
ttttctgggatgaaccggtttaatcggagcacgtggagtaaagttcagtgtgaaatgatt
ttggccttcttatcatttgcagaatatttcaggcccaagttttttcttctagagaatgtt
aggaattttgtgtctttcaacaaaggacagacattcagattgactcttgcgtcactttta
gctatgggttatcaggtaaggtttggtatcctggaagcaggagcctatggtgtctcccaa
tcaagaaagagggcgttcatttgggctgcttcaccagaagagactcttccagaatggcca
gaacctatccatgtgtttgctacccctgagcttaaaatttctatgcctaggaatgggtat
tatactgccgtccgaagcacagctggaggagctccttttcgttcgattactgttagggat
acaattggtgatcttccaccagttgcaaatggagctgccaaaccgacaattgattacggg
agtgagcccatatcatggtttcaaaagaatatcagaagtggcatgtcggctctaaatgac
catatatcaaaggaaatgaatgaactcaatttgataagatgccaacgtgtaccaaaaagg
ccaggtgctgattggcgtgatctaccagatgaaaaggttaaactgtccactggacaaatg
gttgatttgataccttggtgccttccgaacacagcaaagaggcacaatcaatggaagggg
ttgtttggtaggttggactgggatggcaacttcccgacttccatcacagatccccaacca
atgggcaaggtagggatgtgcttccacccggatcaagatagaattctcactgtccgtgaa
tgtgcaagatctcaaggtttcccagacagttaccagttttctggtaacgtccaaaacaag
cataggcaaattggaaatgctgtgccacctccattagcctatgcactcggaaggaaactt
aaggaagctgttgaacgaaagcaatccccatcagcttaa
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integrated database retrieval system
