Zingiber officinale (ginger): 122005787
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Entry
122005787 CDS
T08725
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00040
Pentose and glucuronate interconversions
zof01100
Metabolic pathways
Module
zof_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122005787
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
122005787
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GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
Pectate_lyase_3
pAdhesive_6
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
122005787
NCBI-ProteinID:
XP_042416929
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Position
1A:158981027..158982617
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AA seq
399 aa
AA seq
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MACSTMTLKAFLFSFILMCLWKSSFEQEIFNPLAYEAEGDGVTDDSQALVDAWDSACEHH
APAIFLIPENTTFLSGPASFEGPCRVTPTVQIRGTLKAIDSLSAFHDPGWIEFKHLDDLH
IDGGGTFDGQGSRSWSHACSYCKKLPMSLRLLKVSNTTVSNLTFVDSKGFHISVQMSSSI
NVNRLNITAPGNSPNTDGIHISESNDVKISDLHISTGDDCISIGQGATDVHIENIICGPG
HGISIGSLGKYENESDVSGVHVRNCSISDTTNGVRIKTWPGSPPSQAFNFTFQDIVMDNV
SNPIIIDQQYCPDAKCVAPPSQVKISNVTYNRIRGTSNEQVAVSLLCSQSVPCENVILQD
INLTMASNITSNATLSTCSNVVNGSAVGTQTPDPCLTKV
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtagtacaatgacgttaaaagcattccttttttctttcattctcatgtgcttg
tggaaatccagctttgagcaggaaatctttaacccattggcttacgaggcggaaggagac
ggtgtgaccgacgatagtcaggcgttagtagacgcatgggactcagcgtgcgagcaccat
gcgccggcgatcttcctcatcccggagaacaccaccttcttgtccggtccggcgagcttc
gaaggcccatgccgcgtcactccgacggtccaaatccgcggcacgttgaaggccatcgat
tccctcagcgccttccacgaccccggctggattgagttcaagcacctcgacgacctccac
attgacggcggcggcaccttcgacggccagggttcccgctcttggtcccacgcctgctcg
tactgcaaaaaactccccatgtcactgaggcttctgaaggtgagcaatacgacggtgagc
aacttgaccttcgtcgacagcaaagggttccatatcagcgtccagatgagctcctccatc
aacgtaaaccgcctcaacataaccgcccccggcaacagccccaacaccgacggcatccac
ataagcgagtccaacgacgtcaagatctccgacctccacatcagcaccggcgacgactgc
atatcgatcggtcaaggcgccaccgacgtccacatagagaatatcatttgtggccccggc
catggaattagtatcggaagtcttgggaagtacgaaaacgaatcggatgtttccggtgtg
cacgtgcgcaattgctccatttccgacacgacaaacggcgtcaggatcaagacttggccg
ggctcccctcccagccaagcattcaacttcacgttccaggacatcgtcatggacaacgtc
tccaaccccatcatcatcgaccaacaatactgtccggatgctaaatgcgttgcacctcca
tctcaagtgaagatcagcaacgtgacgtacaacagaataagggggacttcgaacgagcag
gtggcagtgtcgctactttgcagccaaagcgtgccttgtgagaacgtgattctgcaggac
atcaacctgaccatggcaagcaatatcacgtccaatgccaccttgtcaacttgctccaat
gttgttaatggttctgcagtaggaactcagactcctgatccctgtcttacaaaggtctag
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