Zingiber officinale (ginger): 122006823
Help
Entry
122006823 CDS
T08725
Name
(RefSeq) putative ABC transporter B family member 8 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122006823
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
122006823
04147 Exosome [BR:
zof04147
]
122006823
04090 CD molecules [BR:
zof04090
]
122006823
Enzymes [BR:
zof01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122006823
Transporters [BR:
zof02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122006823
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122006823
CD molecules [BR:
zof04090
]
Proteins
122006823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
Zeta_toxin
AAA_16
AAA_29
RsgA_GTPase
AAA
ABC_ATPase
AAA_21
AAA_5
AAA_15
AAA_24
AAA_18
AAA_30
Motif
Other DBs
NCBI-GeneID:
122006823
NCBI-ProteinID:
XP_042418398
LinkDB
All DBs
Position
7B:108792111..108807417
Genome browser
AA seq
1234 aa
AA seq
DB search
MDGEGKAEGEEAKGHGHGSVFLFADWVDVVLMVMGTAGAVGDGCSVNCLLLFASGVMNSL
GYGKAHSSGLLDHADFMKDVEKYCLYFVYLGLAVLLVAFLEGYCWSKTSERQVLRIRHKY
LEAILRQEVAFFDSQEATTAEIINSISKDTSLIQEVLSEKVPLFFMHSSTFVSGLVFSTY
FSWRLSLVALPLVLLLIIPGLIYGKYLLYLSRRSREAYGKANAVAEQALSSVKTIYSFTA
EKSIVERYAGILDMTVKLGIKQGVAKGLAVGSTGLSFAIWAFLAWYGSRLVMYHGESGGR
IYAAGISFVLGGLSLGMALPEVKHLTEASVATKRIVERINRRPRIDAEDQKGLRVEEMHG
EVEFEGVRFAYPSRPEAAVLRDFSLRVPAGQTVALVGTSGSGKSTAIALLQRFYDVDAGE
VRVDGVDIRKLQLRWIRGKMGLVSQDHALFGTSIRENILMGKPGAAATEMYAAAMTANAH
NFIRQLPEGYETKIGERGALLSGGQKQRIAIARAVIKNPAILLLDEATSALDSESEKLVQ
NALDQASMGRTTLVVAHKLSTIKNADQIAVVDSGRIVEIGTHDELIAQSNSHYSRLVKLQ
RISSNLDPEPESFRPSSVARSSASRLSVTKASPSSFSAFSEDQSSIAATAPAPSFSRLLA
MNAPEWKQAVVGSLSAVVFGSIQPIYALSIGGMIAAFFLQDHNEVEAAIRRYALIFSSLS
LVSILVNLLQHHSFAYMGERLTKRVRIRALEKILTFEVAWFDDDAHSSGALCSRLSNEAA
LVKTLVADRVSLLLQTASGVVVAMTMGLIIAWKLALVMIAIQPSTMICHYAKKVVLSRVS
VALAKAQHSSTQIAVEAVYNHRMVTSFGCADKVLELFTEAQEEPVRASRKKAWVAGLATG
SSPCLSFLAWALDFWYGGSLAQSGEISAGDVFKTFFILVSTGKMIAEAGSMTSDLAKGAT
AVASVFEVLDRQSFIPASSSSSSSSNGESKKIHGKIEIRKVDFAYPARPQCPVLRDFSLE
VKAGTSMALVGRSGCGKSTVVSLIQRFYDVDRGVVRIDNTDVRELDLIWFRGFTALVSQD
PVLFSGTVRDNIALGKPNSTEDEIVEAARAANAHDFISSLKDGYGTNCGERGVQLSGGQK
QRISIARAIVRNPTILLLDEATSALDVESERAVQEALDRIMVGRTTVVVAHRLNTIKNLD
SIAFLGEGKVMERGSYAQLIAKKGAFFDIAALSA
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atggacggagaaggcaaagctgaaggagaggaagccaaaggacatggccacggatcagtc
ttcttatttgcagattgggtggacgttgtgctgatggtgatgggaaccgcgggagctgtg
ggagatggatgctcggtcaattgccttcttctcttcgccagcggagtcatgaacagctta
ggctacggcaaggctcacagctctggccttcttgaccatgcagatttcatgaaggacgta
gagaagtattgcttgtactttgtgtacttgggattggcagtgctgctggtggcctttttg
gaagggtattgttggagcaaaacgagtgagaggcaggtgctgaggatcagacacaagtat
ttggaagctattctgagacaagaggttgcattctttgattcacaagaggcaacaacagca
gagatcattaacagtatctcaaaggacacttctctaattcaagaagtgctaagtgagaag
gtgccgcttttcttcatgcactcttccaccttcgtctccggcctcgtcttctccacctac
ttctcctggaggctctccttggtggcgcttcccctcgtcctcctcctcatcatccccggc
ctcatctacggcaagtacctcctctacctctcccgcaggtcccgcgaggcatacggcaaa
gccaacgccgtcgccgagcaggcgctcagctccgtcaagaccatctactccttcaccgcc
gagaagagcatcgtggagaggtacgccggcatcttggacatgaccgtgaagctaggcatc
aagcagggcgtcgccaagggactcgcagtgggaagcacgggcttgtccttcgccatctgg
gccttccttgcttggtatgggagcaggctggtgatgtaccatggagagagcggtggccgg
atttatgcagccgggatttccttcgttttgggcggattatctctgggcatggcgctgcct
gaggtgaaacacttgacggaggcatcggtggcgacgaagagaatagtcgagaggatcaac
agacgaccgcggatcgatgcggaggatcagaagggattgagagtggaggagatgcatggc
gaggtggagttcgagggcgtccggttcgcgtacccttcgcggccggaggcagccgtgctt
agggacttcagcctccgggtcccggcggggcagacagtggcgttggtaggcaccagcggg
agcggcaagtcgaccgcaatcgcgctgctgcagcggttctacgacgtggacgccggcgag
gtgagggtcgacggcgtggacatcaggaagctgcagctgaggtggatcaggggaaagatg
gggctagtgagccaagaccatgctctgttcgggacgtcgatcagggagaatattctgatg
gggaagcccggagccgccgccacggagatgtacgccgccgccatgactgcgaatgctcac
aacttcatccggcaattgccggagggatacgagaccaagatcggggagagaggcgcgctt
ctatccggcggccagaagcagcggatcgccatcgccagagcagtcatcaagaatcctgcc
attcttcttctcgatgaagccaccagcgcgctcgactccgaatcggagaagctggtccag
aacgccctcgatcaagcctccatgggaagaacaacactggtggtcgctcacaagttgtcc
acgatcaagaacgccgaccaaattgcggtggtcgattccggaaggatcgtcgagatcggc
acccacgacgagctcatcgctcagagtaacagccactactcgcgcctggtgaagctgcag
aggatttcgagcaatctcgatccggagccggaatccttccgcccttcctccgtcgcgagg
agcagcgcgagccgcctcagcgtcacaaaagccagcccctcttccttctcggccttctcc
gaggatcagtctagcatcgccgccaccgcccctgcgccatccttctcccggctccttgcg
atgaacgcgcccgagtggaagcaggccgtcgtcggcagcctctccgccgtcgtatttggc
tccatacagcccatctacgcgctctcgatcggcggcatgatcgccgccttcttcctccag
gaccacaacgaggtggaagccgccatccgccgctatgctctaattttctcctccctctca
ctggtttcgatcctggtcaatctgttgcagcaccacagcttcgcctacatgggcgagcga
ttgacgaagcgtgttcggatccgggcgctggaaaagatcctaactttcgaggtggcgtgg
ttcgacgacgacgcgcactccagcggcgcgctgtgctcgcggctgagcaacgaggcggcg
ctggtaaagacgctggtcgcagaccgcgtgtccctgctgctccagaccgcctccggggtg
gtcgtcgccatgaccatggggctgatcatcgcctggaagctcgccctggtcatgatcgcg
atccagccgtcgacgatgatctgtcactacgccaagaaggtggtgctgtcgcgggtgtcg
gtggcgctagcgaaggcgcaacacagcagcacgcagatcgccgtcgaggccgtgtacaac
caccggatggtgacttccttcgggtgcgccgacaaggtgctggagctgttcacagaggcg
caagaggagccggtgagggcgtcgaggaagaaggcgtgggtggcgggcctggcaacagga
agctcgccctgcctgtcgtttttggcgtgggcgttggacttctggtacggaggtagtttg
gcgcagtccggcgagatatccgccggagacgtgttcaagaccttcttcattttggttagc
acggggaagatgatcgccgaggccggcagcatgacttccgacctggccaagggcgccacc
gctgtggcgtcggtgttcgaggtgttggaccggcagtccttcataccagcttcttcctcc
tcctcctcttcttccaacggcgagagtaagaagatacacgggaagatcgagatccggaag
gtcgacttcgcgtacccagcgcggccgcagtgcccggtgctgcgtgacttcagtttggag
gtgaaggccgggacgagcatggccttggtcggccggagcggctgtggcaagtccaccgtc
gtcagcctgatccagcgcttctacgacgtcgaccgcggcgtcgtccgcatcgacaacacc
gacgtccgggagctcgacctgatctggttccgcggcttcaccgccctggtcagccaagac
ccggtcctcttctccggcaccgtccgcgacaacatcgccctgggcaaacccaactccacc
gaggacgagatcgtcgaagccgcacgagccgccaacgcccatgacttcatctcatcgctc
aaggatggatacggaaccaactgcggggagcggggtgtgcagctgtcgggagggcagaag
cagaggatctcgatcgcgagggcgatcgtgcggaacccgacgatcctgctgctggacgag
gcgacgagcgcgctggacgtggagtcggagagggcggtgcaggaggcgctagaccggatc
atggtggggaggacgacggtggtggtggctcaccgcctgaacaccatcaagaatctcgat
tccatcgcttttctcggcgaggggaaggtgatggagcgggggagctacgcgcagctgatc
gccaagaagggcgccttcttcgacatcgccgctctatctgcctga
DBGET
integrated database retrieval system
