Zingiber officinale (ginger): 122008236
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Entry
122008236 CDS
T08725
Name
(RefSeq) ABC transporter D family member 1-like isoform X1
KO
K25819
ATP-binding cassette, subfamily D (ALD), peroxisomal ABC transporter [EC:
7.6.2.4
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof02010
ABC transporters
zof04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122008236
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122008236
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
122008236
Enzymes [BR:
zof01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
122008236
Transporters [BR:
zof02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
Others
122008236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
AAA_23
SMC_N
AAA_29
NACHT
AAA_16
Rad17
Motif
Other DBs
NCBI-GeneID:
122008236
NCBI-ProteinID:
XP_042419824
LinkDB
All DBs
Position
8A:complement(29161003..29201588)
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AA seq
1329 aa
AA seq
DB search
MPSLQLLKLTERGCNLLASRRRMLAAVSAVLVASGTVAYMQSCRNRRRLLKTENSANCTT
SSETVKSLSLNSAGDQQVHNARQRRKGLGSLRALASVLLSSMGPNGRHYLMALVTTVALR
TTMSNRLAKVQGFLFQAAFLRRVPTFLRLILENLLLCFLQSTLYATSKYLTGSLSLHFRK
ILTELIHEDYFENMVYYKISHVDDRINNPEQRIASDIRKFCSEFSEIIQDDLTAVTDGLT
YTWRLCSYASPKYVLWILAYVIGAGASIRVFSPDFRNLMSMEQQLEGNYRQLHSRLRTHV
ESIAFYGGETREASYINEKFEALVKHLNIVHRDQWWFGIIQDFLLKYLGATVAVVLIIEP
FFAGALSLDASTLGRAKMLSNLRYHTSVITSLFQSLGTLSTSSWRLNRLSGFADRIHELM
IVSKELRAIGDKSLIQRNSSSKYIYEADYIEFSCVKIVTPTGNVLVDDLSLQVDSGSNLL
ITGPNGCGKSSIFRVLGGLWPLISGYLVKPGIGSGLNKEIFYVPQRPYTVVGTLRDQLIY
PLTTDQETEPLTYDGMVELLKNVDLEYLLDHYPLDEEMNWEDELSLGEQQRLGMARLFYH
KPKFAILDECTSAVTTKMEERFCEKVRAMGTSCITISHRPALVAFHDMILALDGEGGWRV
QYKRDALSHPYKTKHDLQKLSGTICLDYACAVHRTSTSGEENMLLTSNGHSYSSKVIAFS
PEIDKEDPLPSVPQLEKPLKVLPHRVSSMFKVLVPSPFDKQAMRLLAAALIIGSRTWISD
RIASLNGTTVKYVLEQDKSAFIRLVGVSVLQSAANSLLAPTLRHLTVRLALGWRICLTQH
LLKNYLKGNAFYKVFQMSSKHIDADQRITQDVEKLASDLSGLVTGMVKPCVDILWFTWRM
KLLSGWRGVTILYAYMILGLGFLRGIAPEFGALSSREQQLDGAFRYMHARLRTHAESIAF
FGGGSREKVMIDSGFREFLQHRKIRLRMKCLYAIVDDFITKQLPHNVTWILSLLYALEHK
ADQALASTQGELAHAMRFLASVVSQSFLAFGDIIELHKKYLELSGGINRIFELDELLEAA
QSDVLLSDACVCSEENEMASQDIVTFCKVDIVTPSQKLLAKQMTCDVVPGKSLLVTGQCK
GPNGSGKTSIFRILRGLWPIGSGRLMKPCHSVFYVPQRPYTCPGTLRDQIIYPFSHDEAK
LRMTTMVRTGHNFLLDDHLTVILERVRLVYLLEREGWDAIANWEEVLSLGEQQRLGVARL
FFHHPKFGILDECTNAISVDVEEHLYHLAKEMGITVITSSQRPALVPYHAMELTLVDGRG
KWVLCELSQ
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atgccttccttacaattactaaagttaactgagcgtggatgtaacctactggcatcaagg
aggagaatgcttgcagcagtctcagctgttctagtggctagtggaacagttgcatatatg
caatcatgtcgcaacagaagaagattattgaaaacagagaattctgcaaattgcaccact
tccagtgagactgtaaaaagtttgagcctaaatagtgctggtgatcagcaagttcataat
gcaaggcagagaagaaaaggattgggatctttacgtgctttagcctcagtgctgctctcg
tcaatgggccccaatggtagacactatcttatggccttagtgactacagtggcgttgaga
actaccatgagtaatagactggcaaaagttcaaggttttttgtttcaagctgctttcctt
cggcgtgtacccacctttttgcgcttaattcttgagaatcttcttttatgttttcttcag
tccactttatatgcgacatcaaaatacttgacagggtccttaagtctgcatttccgaaaa
atcttgacagagctcatacatgaggattattttgagaacatggtatactacaaaatctca
catgttgatgatcgcatcaacaacccagagcagaggattgctagtgatataagaaagttt
tgttctgaatttagcgaaattatacaggatgatctcacagcagtaacagacggcctgaca
tatacctggcgcctatgttcttatgcaagtccaaaatatgtgctatggatactggcatat
gtcatcggggcaggtgcttctattagggttttctctccagattttagaaatctaatgtcc
atggagcaacaattagaagggaactatcggcagcttcactcacgattgaggactcatgtt
gaaagtatagcattctatggtggggagactagagaagcatcttatatcaacgagaagttt
gaggctcttgtaaaacatttgaatattgttcatcgtgatcaatggtggtttggaataatt
caagatttcctcttgaaatatcttggtgctacagttgcagttgtgctgattattgagcct
ttttttgctggtgcactcagtcttgatgcctctactcttggaagagcaaaaatgctgagt
aatcttcgttatcatacaagtgtgataacatccctttttcaatcacttgggactctctcc
accagttcttggcgactgaaccgcctcagtggttttgctgaccgcattcatgaactaatg
attgtttcaaaggaactacgtgccattggtgacaagtcattaatccagagaaattctagc
agtaaatatatctatgaagcagattatattgagttttcttgtgttaagatagttacacca
acaggaaatgtattggtcgatgatttgagtttgcaggtagactcaggttcaaatctatta
attacaggtcctaatggatgtggaaaaagttccatcttccgcgttcttggaggtctgtgg
ccacttatatctggataccttgtaaaacctgggattggttcaggccttaataaggagatc
ttttatgttccacagcggccatatacagtagtcgggacactccgtgatcaattgatctat
cctcttactacagatcaggagactgaaccactcacctatgacggaatggttgagctgctg
aagaatgttgatcttgagtatttgctggatcattatcccttagacgaggaaatgaactgg
gaagatgagctttctcttggtgaacaacagagacttggaatggccaggttattctatcac
aagcctaagtttgctattcttgatgaatgtacaagtgcagtcacaaccaaaatggaggaa
cgcttctgtgagaaggttcgagctatgggaacatcctgcattacgatctctcaccgacct
gcattagttgcattccatgacatgattttggcattggatggggaaggagggtggagagtc
cagtataagagggatgctttgtctcacccttataaaacaaaacatgatttacaaaaactt
tcgggaactatttgtctggattatgcatgtgctgttcatagaacttctacaagtggggag
gaaaatatgttattgacatctaatgggcattcatattcaagtaaagttattgcattttca
cctgaaatagacaaggaggatccccttcctagtgttccacaactggagaaaccactaaag
gttctgccgcatagagtttcttcaatgtttaaagtgctggttccctccccttttgataaa
caggctatgaggttattagcagctgctttaattattgggtctagaacatggatctccgac
cgtattgcttctttgaatgggaccaccgtaaaatatgtcctagaacaggacaaatcagcc
tttattcgattggttggtgtaagtgttcttcaaagtgccgctaattctcttcttgcaccc
acgttaaggcatttaactgtgaggcttgcccttggatggagaatatgtttaacccagcat
ttattgaaaaattatctgaagggaaatgctttttacaaggtgttccaaatgtctagtaaa
catattgatgcagatcagaggataacccaagatgttgagaaattggcatctgatctctca
ggactggttactggaatggtaaagccatgtgtagacattctttggttcacatggaggatg
aaactcttaagtggatggaggggagttactatattatatgcctatatgattcttggtttg
ggattcctaaggggcattgctcctgaatttggtgccctatcaagtagggaacaacagctt
gatggggcttttaggtatatgcatgcaagactgcgcacacatgcagagtccattgctttc
tttggtggtggctcacgggagaaagtcatgattgattcaggattcagggaatttcttcag
caccgtaagatccgtttaagaatgaaatgtctctatgctatagtagacgacttcatcact
aaacaacttcctcacaatgtaacatggatattaagtctactgtatgctttggagcataaa
gctgatcaagcattggcttctactcaaggtgaactcgcacatgcaatgcgatttttagct
tctgttgtctcacaaagctttttagcatttggagacattattgagttgcataagaagtat
cttgaactctctggtggaataaacaggatttttgagttagacgaacttcttgaagctgcc
caaagtgatgttttattatcagatgcttgtgtatgctctgaagaaaacgaaatggcttct
caagatattgtaacattctgcaaggtggacattgttactccatctcagaagctgttggct
aagcagatgacttgtgatgttgttcctggaaaaagtctacttgttactggtcagtgcaaa
ggtccaaatggaagtgggaaaacatccatttttagaattcttcgaggtttatggccaatt
ggatctggtagacttatgaagccctgccatagtgtgttttatgttccacagagaccatac
acatgtccggggactttgagggatcaaatcatttatcctttttcacatgatgaagcaaaa
ctgagaatgactaccatggtgagaactggtcacaacttccttctagatgatcatctgacg
gtgattctggagagagttagattagtttatcttcttgaacgagaaggctgggatgctatt
gccaattgggaagaagttctctctttaggagaacagcagaggctgggagtggctcgctta
tttttccatcacccaaaatttggtatcttggacgaatgcacaaatgccatcagcgtggat
gttgaagaacatctgtaccacctagcaaaagaaatggggataacagttatcacatcctcc
cagcgacctgccctggtaccataccatgcaatggagttgacacttgttgatggcagggga
aagtgggtgttatgtgaacttagccagtga
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