KEGG   Zingiber officinale (ginger): 122009346
Entry
122009346         CDS       T08725                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 4-like isoform X1
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03020  RNA polymerase
zof03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    122009346
  09124 Replication and repair
   03420 Nucleotide excision repair
    122009346
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zof03021]
    122009346
   03400 DNA repair and recombination proteins [BR:zof03400]
    122009346
Transcription machinery [BR:zof03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     122009346
DNA repair and recombination proteins [BR:zof03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      122009346
SSDB
Motif
Pfam: RNA_pol_Rpb4 TRC8_N
Other DBs
NCBI-GeneID: 122009346
NCBI-ProteinID: XP_042421398
LinkDB
Position
8A:complement(66534035..66537016)
AA seq 162 aa
MSGEEEENAAELKIGDEFLKAKCLMNCEVARILDHKYDQLQQMSADPTNQISQVFEKSMQ
YVKRFSNYKNTDAVRQAREVLSRYKLAEFEVWPFFRLKFPRHLVTFNHINVHLQLCVLGN
LCPDTVEEAIAIVPSIKSKGRKLEDDAIEKMLHDLSLIKKFE
NT seq 489 nt   +upstreamnt  +downstreamnt
atgtcgggagaggaggaagagaacgctgctgaattaaagatcggggatgagtttttgaag
gccaaatgtctgatgaattgtgaagttgctcgaattctcgatcacaaatacgatcaactc
cagcagatgtctgctgatcctacaaaccagatctcccaagtatttgagaaatcaatgcaa
tatgtcaaacgctttagtaactacaagaacacagatgcagtgaggcaagcacgagaagtt
ctaagcagatacaaattagcggagtttgaggtatggccattttttcgcttgaaattcccg
aggcatctcgtaacatttaaccatattaatgttcatttgcagctttgtgtactgggaaat
ctctgtcctgatactgttgaagaagctattgcaattgtcccatctatcaagagcaaaggt
cggaagctggaagacgatgcgattgagaaaatgctgcacgatctctcgttgatcaagaaa
tttgagtag

DBGET integrated database retrieval system