Zingiber officinale (ginger): 122012097
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Entry
122012097 CDS
T08725
Name
(RefSeq) glutamine--tRNA ligase-like isoform X1
KO
K01886
glutaminyl-tRNA synthetase [EC:
6.1.1.18
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00970
Aminoacyl-tRNA biosynthesis
zof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122012097
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
zof01007
]
122012097
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
122012097
Enzymes [BR:
zof01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.18 glutamine---tRNA ligase
122012097
Amino acid related enzymes [BR:
zof01007
]
Aminoacyl-tRNA synthetase
Class I (A)
122012097
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
122012097
Prokaryotic type
Other AARSs
122012097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
tRNA_synt_1c_R1
tRNA-synt_1c_C
tRNA-synt_1c_C2
tRNA_synt_1c_R2
Motif
Other DBs
NCBI-GeneID:
122012097
NCBI-ProteinID:
XP_042424480
LinkDB
All DBs
Position
8A:complement(3302689..3309910)
Genome browser
AA seq
739 aa
AA seq
DB search
MVATKCPANALIHRPTLVRYIVSSKIKNQVQLDAALAFLSSIEPETFKLNEFEEACGVGV
DISSEEIESSVNAVVEENMNSILEQRHRINVGNLCGQVRKHHLWADARIVKELIDQKLRV
ILGEKTAEDDKEPLKKKEQPVKVEEKASDAIACAPSVEEEVNPFLIFPEPAENFKVHTQI
FFSNGDIWRAYNTKENLERHLKFTGGKVFTRFPPEPNGYLHIGHAKALFIDFGLAKDRGG
SCYLRFDDTNPEAEKKEYMDHNQEIIQWMGWQPFKVTHTSDYFQELYDLAVELIRRGLAY
VDHQTPEEVKEYREKKMNSPWRDRPIAESLKLFKDMKRGLIEEGKATLRLKQDMQSHNKN
MYDLIAYRIKFVHHPQVGDKWCIYPSYDYSHCIVDSLENVTHSLCSLEFGIRRPSYYWLL
VALGLYQPYVWEYSRLNVTNTVMSKRKLKRLVTEKWVDGWDDPRLMTLAGLRRRGVSSTA
INSFIRGTGITRSDNSMIRVDRLEYHIREELNKTAPRTLVVLHPLKVMITNLHPDSVIDL
DAKMWPDAPSNDSSSYYKVPFTNVIYIEQSDFRLKDSKDFYGLAPGKTVLLRYAFPIKCT
EVILGDNGTVLEIHAEYDPSKKTKPKGVLHWVAQPSPGIEPLKMEVRLFEKLFLSEDPAK
LEDWLADLNPHSKELIPEAYAVPSLANAVLGDKFQFERLGYFAVDLNSSSPDKLVFNRII
TLRDSYSKSGKRVNLSVSY
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggttgcgacgaagtgcccagctaacgcactaattcaccggcctacgctggttcggtat
atagtttcatcaaagattaaaaaccaggtccagctagatgcagctttagcatttctaagc
agtattgaacctgaaactttcaagttgaatgaatttgaagaagcttgtggtgtaggagtg
gatatttcgagtgaagagattgagtcatcagttaatgctgtcgttgaagaaaatatgaat
tcgatattggaacaacgtcatcgtatcaatgtcggcaatctatgtggtcaagtcagaaaa
catcacctgtgggccgatgccagaattgtgaaggaattgattgatcagaagcttcgagtg
attcttggtgagaagacagctgaagatgataaggaacctctaaaaaaaaaggaacagcct
gtgaaagttgaggaaaaagcaagtgatgcaattgcatgtgctccaagtgtggaggaggaa
gtgaatccattcttgatatttccagaacctgctgaaaactttaaggttcacacacagata
tttttcagtaatggagacatctggagagcttacaatacaaaggagaacctggaaagacat
cttaagtttactggtgggaaggttttcactcgtttccctcccgaacctaatggatatcta
catattggccatgctaaggcactgtttattgattttggtttagcaaaagataggggaggg
tcatgctacttaaggttcgatgatacaaatcctgaagctgaaaagaaagagtacatggat
cataaccaagaaataatacaatggatgggttggcagcctttcaaagttacccacacgagt
gactactttcaagaattgtatgatctagcagtggaattgatacgcagaggcctagcatat
gttgatcatcagactccagaagaagtaaaggagtacagagagaagaaaatgaacagccca
tggagggatagacctattgcagaatctttgaagttatttaaagacatgaaaagaggtttg
attgaggagggaaaagctacactcagactgaagcaagatatgcagagtcataataagaat
atgtatgatttgatagcgtatcgtattaagtttgttcaccatcctcaagtcggcgacaag
tggtgtatatatcctagttatgactattctcactgcatagtggattcactggaaaatgtt
acacattcactttgttcgcttgagtttggcatccgccgtccttcatactactggttactt
gttgctttaggcctttaccaaccatatgtatgggagtactcacgtttaaatgttacaaat
actgtcatgtctaagcggaagttaaagcgactggtaacagaaaagtgggttgatggatgg
gatgatccccgtctaatgacattagctgggctgcgacgacgaggagtctcttcaacagca
atcaactcttttatcagaggaactggaattactagaagtgataatagtatgatacgagtt
gatcgccttgaataccacattagagaagagctcaacaaaactgcacctagaactctggtg
gttttacatcctctaaaggtgatgatcacaaatctccatcctgattcagtaatagatctt
gatgcaaagatgtggcctgatgctccatcaaatgattcttcttcatattacaaggttccg
tttacaaatgtcatttatatagagcaatcagattttcgtctcaaggattcaaaagatttc
tatggcctcgcacctggaaaaacagttcttctcagatatgcgttccctataaagtgcaca
gaagtaatactcggggataatggcactgtcctcgagattcatgctgagtatgacccttca
aaaaaaacaaaaccaaagggtgttcttcattgggttgctcaaccttcccctggtattgaa
cctctcaagatggaggtcaggttatttgagaaattatttctttcagaggatccagccaag
ttggaggactggttagcagatctcaatccacattcaaaggagttgattcctgaagcatat
gcagtcccttctctcgccaatgctgttttgggtgacaagttccagtttgagagactcggc
tactttgctgttgatctgaactcttcttcccctgataaactggtattcaacagaatcatc
accctccgggattcatattctaagtctggaaaaagagtaaatctcagtgtttcttactaa
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