Zingiber officinale (ginger): 122012754
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Entry
122012754 CDS
T08725
Name
(RefSeq) protein PHYLLO, chloroplastic-like isoform X1
KO
K14759
isochorismate synthase / 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase / 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / o-succinylbenzoate synthase [EC:
5.4.4.2
2.2.1.9
4.2.99.20
4.2.1.113
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00130
Ubiquinone and other terpenoid-quinone biosynthesis
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
zof01240
Biosynthesis of cofactors
Module
zof_M00932
Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
122012754
Enzymes [BR:
zof01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
122012754
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.113 o-succinylbenzoate synthase
122012754
4.2.99 Other carbon-oxygen lyases
4.2.99.20 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
122012754
5. Isomerases
5.4 Intramolecular transferases
5.4.4 Transferring hydroxy groups
5.4.4.2 isochorismate synthase
122012754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MR_MLE_C
Abhydrolase_6
TPP_enzyme_M_2
Abhydrolase_1
TPP_enzyme_N
Hydrolase_4
TPP_enzyme_C
Abhydrolase_2
Ndr
Abhydrolase_3
Thioesterase
BAAT_C
DLH
DUF1057
Mbeg1-like
Abhydrolase_11
LIDHydrolase
Cutinase
DUF726
MenC_N
PGAP1
VMAP-M9
Esterase
DUF900
Motif
Other DBs
NCBI-GeneID:
122012754
NCBI-ProteinID:
XP_042425330
LinkDB
All DBs
Position
8A:complement(16379659..16433498)
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AA seq
1718 aa
AA seq
DB search
MLALSLLHLSSSSSKPSPFDLLNPRLFPVLPGAISIVGPDLPCRSRLPHRRFRILRSRSE
MEFHVNADRGCHKRGLEIDADGIVGVEDLDLPVDICATRVLPSALSLAAGFDKIKVAVEE
FKVNPPRMRSGVMRFQVEVPPSTKASNWLCCQNKDLLVYPQFYLTTTSSTVEMKRPLEVC
GIGVAVIVHGFLFTPQGSSLISRYLSIDSPLIRAYGFLGNYIDGSLLVEMLSSYFLCIPQ
FVVEEHMGCSILAATLVWDDRMLYTFADAINAFEINVHQMRYYIPQVSTIDKLWMNHADK
KSPLVGKKDIQMVYLNAELLAGWNFSQANNNIQEKELPTSCQFYFRHSSTMSVGTIRIMD
SHGSICLAEDYANINTVWASLIVEECVRLGLTYFCIAPGSRSSPLAIAACRHPYTTCFSS
YDERSLAFHAVGYAKGSHKPAVVITSSGTAVSNLLPAVVEAHHDFTPLILLTADRPPELH
DAGANQSIDQVNHFGKFAKFFGLPAAMDQVPVRMILTTIDSALHYATQVPFGPVHINCPF
REPLEDSPKEWKIDCLKGLDSWFAKTEPYTKYITMQLLFASNNCNSQLAEVTAIIQRAER
GLLLIGAIENEDEIFASSLLVKHLSWPVVCDIMSGLRLRRVLSSFSEMKFLFIDHMDHAL
LSDSVRSWAHPDVVLQLGRRITSKRISQFLEFCSPSSYILVDKFPCRHDPSHIVTHRVQS
TIIEFTHILQKIQFPRQAGRWRTFLNKLNAAVAQEIEFQIYSKCFLTEPYVAHVIGEVLN
DDTSLFIGNSMVIRDIDMYGKGWLSSMSCDYQTVSNLGVEFQGFRVAGNRGASGIDGVLS
TAVGFAVGCNKHVLCLIGDVSFLHDTNGLAILNERVKRKPLTVVVINNHGGGIFSLLPVA
ERANPDVLNKFFYTCHNISIKRLCTAHSVKHFLVRTMSELQNALSKSQQEQYDCVIEVES
SIVENANFHRIINKFSSEAANKTLNFLLTNMENRLFTHKIHKVEYSLYRIQLCAPLTSSL
LNGEMESFFHEGFILRIYLDNNIVGLGEVAPIEIHAEDLLDVEEQLRFLVHKLVGSNISF
IPLLRGSFSEWIWRSLAIPASSIFPSVKCGLEMAILNTLAMNEASSFFDVISGYGSSSVE
PLLDADGNDGPKQIEICALIDHSGSPKEIADVVYQLVDEGFNTIKLKVARRKNPLEDVEV
IRAIRQVVGYKINIRVDANRKWTYEEALQFGSCVKHFHLQFIEEPVNREMDILKFCDESS
LPVALDETIDNLKGDLFHGLKKFAHPGIVAIVIKPSVLGGFENAATVAKWAQLHKKIAIV
SSAFESSVSLSVYIQFAYYLERQNAAVCKIEGRELNAAIAHGLGTYRWLKEDVTSSGIDI
CMSSDRYRLVASVEKAENFLKLVQINKANIQKSYSEEQTSAYQTEVDGEFFSCSFKFLKV
GQNLNNRTVVFLHGFLGTSEEWIPIIRSISASVHCISIDLPGHGESKLQSLVDKSSKQRL
DLSVESVANILLKLISGITSGKVILVGYSMGARIALNMAVKYKEKVIGAVIISGSPGLRN
ETTKRIRVAQDEAKANFLVEHGLECFLDLWYSGILWRSLRGHPNFSHIKSSRSRHKDIQG
LANVLSSLSVGKQLSLWDDLKHLQTPLLFIVGEKDTKFREIAQQMCSEIERGSIADQHRQ
RKLFDTIVVPDCGHAVHLENPLCVINAVSKFVERWGQK
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atgctagcgctcagcttgctccatctctcttcgtcatcctccaaaccctcacccttcgat
ctcctcaatccccgcctctttcccgtcctcccaggcgccattagcatagttggacctgat
ctcccatgtcgatcacgtctcccccaccgtcgcttcaggattctccgttcgcgttcggag
atggagtttcatgtaaatgcagatcgtggttgtcataaaagggggctggagatcgacgct
gatgggatcgtgggagtggaggacttggatttgccggtggatatttgtgcaactcgagtt
ctgccctctgctctttcgctggcggcagggtttgacaagataaaggtggcggtcgaggag
ttcaaggttaacccaccacgtatgaggagcggcgtcatgagattccaggttgaagtacct
cctagtacaaaggcatcgaattggctttgctgtcaaaataaggatcttttggtgtatcct
cagttttatctcacaactacatcgtctactgttgagatgaaaagaccactggaagtttgt
gggattggtgttgcagtcattgtccatggttttttgttcaccccacagggttcaagtctg
atatcaagatatctttcaattgattcacccctgataagagcttatgggttcctaggtaat
tatattgatggttcattgttggtggagatgctcagttcatatttcctctgtattccacag
tttgtggttgaagaacatatgggttgttccattttggcagctaccctggtttgggatgat
cgtatgttatatacatttgctgatgcaattaatgcctttgagatcaatgttcaccagatg
agatactatattcctcaagttagtaccatcgacaaattatggatgaaccacgctgacaag
aagtcacctttggttgggaagaaagatatacaaatggtttatttgaatgctgaattgctt
gctggatggaatttttctcaagccaataataatattcaggagaaagagcttccaacttcc
tgtcagttttattttaggcattcttccactatgtctgttggaactattaggattatggat
tctcatggctccatttgcttggcagaggattatgcaaacataaacactgtctgggcgtca
cttatagttgaagaatgtgttagattaggtttgacttacttctgtatagctccaggatca
agatcatctccacttgcaattgctgcttgtcgtcatccttacactacttgtttttcatct
tatgatgaacgctcactagcatttcatgctgttgggtatgccaaagggtctcacaaacct
gctgtggtcataacatcatctggcacagctgtgtcaaatcttcttcctgcggttgtggag
gctcatcatgattttactcctcttattctattaacagctgatcgccctccagagctacat
gatgcaggagcaaaccaatctattgatcaggtgaaccactttgggaagtttgcaaagttt
tttggtcttcctgcggcaatggatcaagttcctgtgagaatgattctcacaactattgac
tcagccctgcactatgcaactcaagtgccatttggtcctgttcatattaattgtcccttt
agagaaccactagaagatagtccaaaagaatggaaaatagactgtttaaaaggattagac
tcgtggtttgcaaagacagaaccatacactaagtacatcaccatgcaacttctctttgca
tccaataattgcaactcccaacttgctgaggttacagcaataatacagagggctgagagg
ggactactccttattggtgctattgagaatgaagatgaaatttttgcatcatctcttttg
gttaaacatttatcatggccagttgtctgtgatatcatgtctggtctaagattgcgtaga
gtattaagttcattttctgagatgaagttcttatttattgatcatatggatcatgctcta
ttgtcagactcggttaggagctgggcacatccagatgtagttcttcagcttggaagaaga
attacaagcaaaaggattagccaattcctagagttttgttctccatcttcatatatcttg
gttgacaaattcccatgccgccatgacccttcacatatagtgactcacagagttcaaagc
accattattgagtttactcacattttacagaagattcaattcccaagacaggctggaaga
tggagaacttttcttaacaaattgaatgcagcagttgcacaggagatagaatttcaaatt
tactcaaaatgctttcttacagagccatatgttgcacatgtaattggagaagtactcaat
gacgacacttccttgtttatagggaatagcatggtcattagagacatagacatgtatggg
aaaggctggttgagttctatgagctgtgattatcaaacagtatcaaatttgggcgtagag
tttcagggttttcgggtggctggaaacagaggtgcaagtggtattgatggagtgcttagc
acagctgttggttttgcagttggatgtaacaagcatgtactttgcttgattggtgatgta
tcttttcttcatgatacaaatggcttggcaattcttaatgaaagggtgaagcggaaaccc
ttaactgttgttgtaataaacaatcatggtggtggaattttcagtcttttaccagttgca
gaaagagctaatcctgatgtactgaacaagttcttctacacatgtcataatatctcaata
aaaagactctgtactgcccatagtgtgaaacattttttagtgcggacgatgtctgaactt
caaaatgctttatccaaatctcagcaggagcagtatgattgcgtgattgaagtcgagagt
agtattgtggaaaatgccaattttcacagaataataaacaaattttcttctgaagctgca
aataagacactgaacttcttattaacaaacatggaaaatcgcctctttacccacaaaatc
cacaaggtggaatactcattgtatagaatccaactttgtgctccactgacttcaagttta
ttaaatggtgaaatggagagtttcttccatgaaggctttatcctaagaatatatttggac
aataatattgtaggattgggcgaggttgccccaattgaaatccatgcagaggatctttta
gatgtcgaggagcagttaaggttcttggtgcataagttggtaggatcaaacataagtttt
attccattgctcagaggctcattttctgaatggatttggagatccttagcaataccagcc
tcatccatttttccaagtgttaagtgtggattggagatggctatcctcaataccctggca
atgaatgaagcatccagtttctttgatgtgatctctggttatgggagctcctcagttgaa
cctctgttggatgcagatggtaatgatggtccaaaacagatagagatttgtgctctcatt
gatcatagtggttcaccaaaagagatagctgatgttgtgtaccaattagttgacgagggt
ttcaacacaataaaactgaaggtagcacgaagaaaaaatcctcttgaagatgtagaagtc
atcagagccatcaggcaagtggttggttacaaaatcaacatccgtgttgatgcaaaccgg
aagtggacatatgaggaggcattgcaatttggatcttgtgtaaaacatttccacttgcaa
ttcattgaggaacctgttaatagggaaatggatattctcaaattttgcgatgaaagcagt
ttgccagtagcactagatgagacaattgacaatcttaagggagatctctttcatggactt
aaaaagttcgctcatccaggaattgttgctattgttatcaaaccgagtgttcttggagga
tttgaaaatgcagctacagtagcaaagtgggctcagttgcataagaagatagccattgtc
agtagcgcatttgaaagcagtgtgagtttgtcggtgtatatacagtttgcatattatctg
gagaggcagaatgctgcagtttgcaaaatagagggaagggaattaaatgcagcaatagcc
catggccttggaacatatcgttggctgaaggaagatgtaacttccagtggcatagatatt
tgcatgtcatcggataggtacagactggtagcatctgtcgagaaagctgagaatttttta
aagcttgtgcaaatcaataaagcaaatattcagaaaagctactccgaagaacaaactagt
gcttatcaaactgaagttgatggagagttttttagctgttcattcaagtttctgaaagtt
ggtcaaaacctaaacaatagaacggttgtctttcttcatggcttcttgggtacaagtgaa
gagtggatcccaattataaggagtatatcagctagcgtgcattgcatttccattgaccta
cctggccatggggagtcaaagttacaatcactagtggataagagttctaaacaaagattg
gatttatctgttgaatctgttgcaaatatattgctaaagttgatctctggtatcactagt
ggaaaggtcattcttgttggctattcaatgggtgccaggattgcattaaacatggcagtc
aagtacaaagaaaaggtcattggagctgtcataatctcgggaagcccaggattaagaaat
gaaacaaccaaaagaatccgtgttgcccaagatgaagcaaaggcaaactttctagtggaa
catggtttggagtgctttctggatttatggtactctggcatcctatggagaagcttaagg
ggccatcctaacttcagccatattaagagctctcgcagcaggcataaagacatacagggt
cttgcaaatgttctatcgagcttaagcgttgggaagcaattgtctttgtgggatgactta
aaacacttgcaaacgccactgctcttcatcgtgggagaaaaggatacaaagttccgggag
attgcacagcagatgtgcagtgaaatcgagagaggttccatagctgaccaacaccggcaa
cgaaagctatttgacacaattgtcgtaccagattgtggtcatgctgtacatctagagaat
cctctttgtgtgatcaatgcagtgagcaaatttgtggaaagatgggggcagaaatga
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