KEGG   Zingiber officinale (ginger): 122018893
Entry
122018893         CDS       T08725                                 
Name
(RefSeq) rDNA transcriptional regulator pol5-like
  KO
K02331  DNA polymerase phi [EC:2.7.7.7]
Organism
zof  Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:zof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:zof03036]
    122018893
   03400 DNA repair and recombination proteins [BR:zof03400]
    122018893
Enzymes [BR:zof01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     122018893
Chromosome and associated proteins [BR:zof03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    122018893
DNA repair and recombination proteins [BR:zof03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    122018893
SSDB
Motif
Pfam: DNA_pol_phi UNC45-central
Other DBs
NCBI-GeneID: 122018893
NCBI-ProteinID: XP_042432286
LinkDB
Position
9A:128953422..128961803
AA seq 1284 aa
MGSSKKTAPTSADALDSENHVSVDEVSASEKENIDEGKTESLEDARSLKAMERRKKRKAL
DKGRHQLDEEKKKPRIDTPSEGAALADSQPAASLASSGHPGLHMNVFRDLASSDSLVREA
AAESLVLELSEVQKAYEKKDKREDDGAIQLEAEKDDGLEDCAPALRYAIRRLIRGVSSTR
EYARQGFALGLTVVVRAIPAIKLSSVMKLTIDLLEVSSSMKGQEAKDNLLGRLFSYGSLA
RSGRIATDSSKNIDTSVIKEFITHVVSLYGKKRYLGEPAVSLICDVTDQLSSEVILNEVL
KTTVLHDLFERAAEVGDPDALYLALKMQEKIQVDGEVFGKLLPCPFSAESFFSRDYLLYI
ANCFKESTFCLPRLHSLCPVVVNMLTSEITTHMEDDAVRSASGKKQKKIWKGCSSEDIAK
NIRCFHEVVIEESLLQSSHDRKYLAFQILLLMLPKLPISCIKVVLSEKFVHCLMDILSNR
DAWLYSVAQHFIKELIDLIGDDIDRRVSVIMSLQKHSSGKFDIITKTQLVKGLVAKFNTV
PGCLQFVQSLMSLFVDDGTVTDEPSDQSHTTDENSDLGASEDKETSGSGNIDSLKNWIID
TMPRIQKNLNQNSDVKSVPHTEIVKHIEAKFQVQTGILKFLVVQGLFSASLGTEVTSFEL
QEKFKWPKASISSLLCSMCIKQLQSLLEDAQKRENQYASTGTKFDDLGSYFMCFLSTLHN
IPSVSLYRILTNEDEKAFKRLLKMESKLSEEGKKIRPGPVANKFHAFRYLLIQLVLQVLL
HPGEFSEAALEMIICFKKALPPAFADCDFSDEEYDGDDAPELMDVLVDTLLSLLPQSTGP
LFFAVEQVFKACCDDITDAGLVQMLRVVKKDLKHPRHPIVDSDDDDEEDDDFLGIEEADE
INEVGTDDAVDSDSHADGSEELIRSLATDDNKNSDSSGMDIVEAINQLAKGDNDLSASGD
SDDDMDDDAMFRMDSYITKIFKERKLSGSDSAQSQLIPFKLRVLSLLEIYLQKNPGKTQV
LMVYSYLAKAYVNSHMADSSEQLKQRIGGILQKKIFKVKDYPKSGDIQLHTLETLLEKNL
KSASRSHHKTISLFAQDSTFWLLKIIHARNFSESELNGVINIFQNALTDYLNCKKSRLKA
GFIKEVIKRQSWLGLFVLGFLLEKCISTKMEFRRIEILDIIECIIKSCIIPSKGETNEVA
ASRSKLFKKCLSAACELIQVLLSNMPEKKSRRLVVRRFSTQFLHAVSVRKLNNVFLKVLK
PDSHSVWESQLGESFLSIKYSREK
NT seq 3855 nt   +upstreamnt  +downstreamnt
atgggcagcagcaagaagacggcaccgacttccgcagacgcgttagatagcgagaatcat
gtttcggttgatgaggtttctgcaagtgagaaagagaatatcgatgaaggaaaaacggag
tccttggaggacgcgaggtccctgaaggccatggagaggaggaagaagagaaaggcattg
gacaagggaaggcaccaacttgatgaagagaagaagaaaccgcgcattgatacgcctagc
gaaggtgctgctttggctgactcgcagcctgcggcttctttggcttcttcaggccaccct
gggctccatatgaatgtgtttagggatctagcatcttccgattctttggttagggaagct
gctgcggagtcattggttttagagttgtctgaggttcaaaaggcttatgaaaaaaaggac
aaacgggaggatgatggagctattcaactagaggcggagaaggatgatgggctggaagat
tgtgcgcctgctctgagatatgccattcgtcgacttattcgtggggtatcttctactagg
gagtatgcaaggcaaggatttgcattggggttaacagttgtggttagagcaattccggct
atcaagttgagttcagtgatgaaattgacaattgatttgcttgaagtatcttcttcaatg
aagggtcaggaagctaaagataaccttttgggccgcctcttttcttatggttcccttgct
agatctggacgaattgcgactgattcgagtaaaaacatcgatacatcagttatcaaagag
ttcataactcatgttgtttctttatatggaaagaagcgatacttgggggagccagcagtt
tctctgatttgtgatgtgactgatcagctttcttcagaagttattttaaatgaagtgttg
aaaactactgttctacatgatttgtttgagagagctgctgaggtgggagatccagatgcc
ctgtacttggctttgaagatgcaagagaaaatacaagttgatggcgaagtgtttggcaag
ctgcttccatgcccatttagtgctgaaagcttctttagtcgagattatctgctatatatt
gccaattgctttaaggaatcaaccttctgtttgcctcgtctgcatagtctttgtccagta
gtggtgaacatgcttacttcggaaataacaactcacatggaggatgatgcagtgcgatct
gcatctggtaagaagcaaaagaagatttggaaaggttgctcctcggaggacattgctaag
aatatccgatgttttcatgaggttgtaattgaagagtcacttcttcagtcttctcatgat
aggaagtatttggcattccaaatcttgttgcttatgcttccaaaattgcctatatcttgt
atcaaagttgtcctttctgagaaatttgtgcattgtctcatggacattctttcaaacaga
gatgcatggttgtacagtgttgcccaacattttatcaaggagctcattgatttaattgga
gatgatattgatcgccgtgtttcagttattatgtccctgcagaaacacagcagtggcaaa
tttgatattatcaccaagacacagctggtaaaggggttggttgctaagttcaatactgtg
cctggttgtttgcagtttgtgcaaagtttgatgagtttattcgttgatgacggaactgtt
actgacgaaccatctgatcaaagtcacactactgatgaaaattcagatttaggtgcttca
gaggataaagaaacttcaggttctggtaatatagattccctcaagaactggattatagat
accatgcctcgtattcaaaaaaatttaaatcagaattctgatgtaaagtcagtgccacat
actgaaattgtgaaacatattgaggcaaaatttcaagtccaaacaggaattttgaaattt
ctggtagttcaaggtttgttctctgcatcactaggcactgaagttacttcatttgagttg
caagagaagttcaaatggccaaaagcttctatttcaagtttactatgtagtatgtgtatc
aaacagcttcaatcattgttagaagatgcacagaaaagggaaaaccaatatgcatcaacg
ggcactaaatttgatgatctgggttcttattttatgtgtttcctgagcactttgcacaac
atcccttcagtatcactgtatagaatcttgactaatgaagatgagaaggcattcaaaaga
ctgttgaaaatggaatccaaactttctgaagagggaaaaaaaattaggcctggtccagtt
gcaaacaagttccatgcattccgttatctattgatccagttggtgttgcaagtacttctc
catccaggagagttctctgaggctgcattggagatgattatatgcttcaagaaggcttta
ccacctgcatttgctgattgtgatttttcagatgaagaatatgatggtgatgatgcacca
gagttgatggatgtgctagttgacactttgctttcgcttctaccacaatcaactggtcca
ttgttctttgcagtagaacaggttttcaaggcctgctgtgatgatataacagatgctgga
ttagttcagatgttgcgagttgtgaagaaggatctgaagcatcctcgccatccaattgta
gacagtgatgatgatgatgaagaggatgatgattttcttggaattgaagaggcagatgag
atcaatgaggttggaactgatgatgcagttgacagtgatagtcatgcagatggttctgag
gaattgatcaggtcgttggcaactgatgataacaagaatagtgattcttctgggatggac
atagttgaggcaattaatcaacttgccaagggggataatgacctttccgcttctggtgat
tctgatgatgatatggacgatgatgccatgttccgtatggattcttacattaccaagatt
ttcaaggagcgcaaactttctgggagtgacagtgctcaatcccaactcataccctttaaa
cttcgagttctctcactgctagaaatttatcttcaaaagaatccaggtaagactcaggtc
ttgatggtgtattcttacttggcaaaagcgtatgtgaattcacatatggcggatagtagt
gagcaactaaaacaacgcattggaggcattctgcaaaagaagatatttaaagtaaaagac
tatccaaaaagtggtgacatacagctccacactctcgaaaccttgttggagaagaatcta
aaatcagcatcgcgttcgcaccataaaaccatatctttgtttgctcaagactccactttc
tggttactaaaaatcattcatgcacggaatttctctgaatctgaactgaatggtgtgatc
aatatatttcaaaatgcattaactgactacttgaattgtaagaagtctcgtctgaaagct
ggattcattaaagaggttattaagagacaatcttggcttgggctctttgtccttggtttt
cttctggagaaatgtatcagtacaaagatggagtttcgaagaattgaaattctagatatc
atagagtgtattattaagtcatgcattatacctagcaaaggagagactaatgaagttgct
gctagtaggtctaaattattcaagaaatgcttgtcagcagcctgtgaattgattcaagta
ctgttaagtaacatgccggaaaagaagtcacgacgtttggttgtgcggcgattttctact
cagttcttgcatgcagtttcagtgcgtaaactgaacaatgtttttttaaaggttctgaag
ccagattcgcattcagtctgggagtctcaacttggggagtcatttctttcaattaagtat
agcagagagaagtga

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