Zingiber officinale (ginger): 122027006
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Entry
122027006 CDS
T08725
Name
(RefSeq) putative multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122027006
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
122027006
04147 Exosome [BR:
zof04147
]
122027006
04090 CD molecules [BR:
zof04090
]
122027006
Enzymes [BR:
zof01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122027006
Transporters [BR:
zof02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122027006
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122027006
CD molecules [BR:
zof04090
]
Proteins
122027006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
AAA_16
RsgA_GTPase
AAA_21
ABC_ATPase
Zeta_toxin
AAA_15
AAA_25
AAA_30
DUF87
SRP54
SLATT_6
7TM_GPCR_Srd
Motif
Other DBs
NCBI-GeneID:
122027006
NCBI-ProteinID:
XP_042441731
LinkDB
All DBs
Position
10A:97274845..97280233
Genome browser
AA seq
1252 aa
AA seq
DB search
MGKVEGDETSNVGKEPKQSQSSSSSFSFWSIFRHADRVDKLLMTLGFVGAVGDGVSMPLM
LLLTSKIFNNLGGGSTDSSDFTHSINKNAVNMVYLACGSFVVSFLEGYCWTRTGERQASR
MRARYLSAVLRQDIEYFDLNAGTGSEVITGVSSDSLVIQDCLSEKVPNFIMNGATFIGSY
VVGFFMMWRLALVASPTAVLLIIPGLMYGRILMELARKIRGEYQKAGTVVEQCVSSIRTV
YSSVAEERTMAKFSTALDNSVELGLRQGLAKGLAIGSNGITFVIWAFMVWYGSRLVMYHG
GKGGTVFAVGASIIVGGLSLGSGLSNVKYFSEASSAGERIMTVIHRVPKIDSDSSKGEAL
ENVSGDVEFKNVEFAYPSRPDNYIFRDFNLKIPAGRTVALVGSSGSGKSTVIALLERFYD
PLTGEILIDGIDIRRLQLKWLRSQLGLVSQEPALFATSIKENILFGKEDATMEEVVAAAE
AANAHSFISQLPQGYDTKVGERGVQMSGGQKQRIAIARAVLKSPKILLLDEATSALDSES
ERIVQEALDLASVGRTAIVIAHRLSTIRHADVIAVVQDGSVTEIGSHDDLIDRPDGLYSS
LVRLQRTTAHLREGETSSGAAQLGSSRSMSRRFSAASRTSSGRSVASVSPEDDADERPGK
PKPPVPSFRRLLQLNAPEWRQALLGSASATVFGAIQPLYSYALGSMISVFFLKDHDEIKN
KTRTYAFLFIALSLLSFFINIGQHYNFGAMGEYLTKRVRQRMLSQILTFEVGWFDQDENS
TGAVCARLANDANVVRSLVGDRMALIIQTVSAVVIACTMGLVLAWRLALVMIAVQPIIIL
CFYARRVLLKNLSSKAIKSQTESSKLAADAVANLRTITAFSSQERILRMFEEAQAGPRRE
CVRQSWFAGAGLAFSQSLMTCTWALDFWYGGKLIADGFISAKALFETFMILVSTGRVIAD
AGSMTTDLAKGADAVASVFAVLDRVTAIEPNDPDGHCPERLTGDIEIRGVDFAYPARPDV
VIFRGFSLCIEAGKSTALVGQSGSGKSTVIGLIERFYDPLRGTVKIDGRAVKSYNLRALR
KHIGMVGQEPTLFAGSIRENIAYGSDGEIAPAEIEAAARAANAHEFISALKEGYETQCGD
RGLQLSGGQKQRIAIARAILKDPAILLLDEATSALDSQSEKAVQSALERLMVGRTSVVVA
HRLSTIRHCHLIAVLDQGAVVEKGTHASLISKGPGGAYFGLTALQSGGAAST
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagttgagggagatgagacgagtaatgtaggaaaggagccgaagcagagtcag
tcttcttcttcttctttctccttttggtctatattcaggcatgcagaccgggtggacaag
ttactgatgacactgggtttcgtcggcgccgttggtgacggcgtctcgatgcctctcatg
cttctcttgaccagtaagatcttcaataacttgggaggcggttccacagactcctctgat
tttacccactccattaacaagaatgcagtcaacatggtgtatttggcctgtggaagcttc
gtcgtctcgttcttggagggttactgctggactaggacaggggagcggcaggcgtcgcgg
atgcgcgcccggtaccttagcgctgttctcagacaggatatcgagtacttcgacctcaac
gccggcaccggaagtgaagtcatcaccggcgtttccagcgatagtctcgtcatccaagat
tgccttagtgagaaggtgccaaactttatcatgaacggcgccaccttcatcggcagctac
gttgtggggttcttcatgatgtggcggttggcgctggtagcgtcgcccacggcggtgttg
ctcatcattcccggcctcatgtacggtcgcatcctcatggagctcgctcggaagattcgt
ggagagtaccagaaggccggcacagtggtggagcagtgtgtgtcctccatccgcaccgtt
tactcctctgtggcagaggagcgcaccatggccaagttctccaccgcgctcgataattcc
gtcgagcttggcctccgtcagggtctcgcaaagggcctggctattggaagcaacggcatc
acctttgtcatctgggccttcatggtctggtatggaagccgccttgtcatgtaccacggt
ggcaagggtggcactgtcttcgccgtcggtgcctccatcatcgtcgggggcctgtcactc
ggctcggggctatccaacgtgaagtacttctcggaggcaagctccgccggcgagcgaatc
atgacggtgatccaccgagtaccaaaaattgactccgacagctcaaagggagaagctcta
gagaacgtgtccggggacgtggaattcaaaaatgtggagttcgcatacccctcgcggccg
gacaactacatattcagggacttcaacctcaaaatcccggcaggaaggacggtggctctg
gtgggcagcagcgggtcaggaaagtcgacggtgatcgcactgctggagcggttctacgac
ccactcaccggtgagattctgatagacgggatagatatccggaggctgcagctcaagtgg
ctgaggtcgcagttggggctggtgagccaggagcctgctctgtttgcaacctccattaaa
gagaacatattatttgggaaggaggacgccaccatggaggaggtggtggccgccgcagag
gcagccaatgcccacagcttcatctcacaacttccccaggggtacgacactaaggtggga
gagagaggagttcagatgtccggcgggcagaagcagagaatcgccatcgccagggcggtg
ctgaagtcgcccaagatcctcctgctcgacgaggccaccagtgccctcgactccgagtcg
gagcggatcgtgcaggaggccctcgacctcgcctccgtcggccgcaccgccatcgtcatc
gcccaccgtctctccaccatccgccatgccgatgtcatcgcagtcgtgcaggacggcagt
gtcacggagatcggctcccatgatgacctcatcgaccgccccgacggcctctactcctcc
ctcgtccgcctccagcggaccaccgcccacctccgcgaaggtgagaccagctcaggagct
gcgcaattgggcagcagcaggagtatgagccgccgcttctccgccgccagccgcacaagc
tccggtcgctccgttgcgtcggtatcgccggaagatgacgccgacgagaggcctgggaag
ccgaagcctccggtgccgtccttccggcggctgctgcagctgaacgcgccggagtggcgt
caggcgctgctgggcagcgccagcgccaccgtgttcggcgcaatccagcctctgtattcc
tacgcgctcggcagcatgatctctgttttcttcctcaaagaccacgatgagatcaagaac
aagacgaggacctacgcgttcctcttcattgccctttccttgctctccttcttcatcaac
atcgggcagcactacaacttcggcgccatgggcgagtacctcaccaagcgtgtccgccag
cggatgctgtcccagatcctcactttcgaggttggctggttcgaccaggacgagaactcc
accggcgccgtctgcgcccgcctcgccaacgacgccaacgtcgtccgctccctcgtcggc
gaccggatggccctcatcatccagaccgtctccgccgtcgtcatcgcttgcaccatgggg
ctcgtccttgcctggagactggcgctcgtcatgatcgccgtccagcccatcatcatcctc
tgcttctacgcccgccgcgtcctcctcaagaacctctcctccaaagccatcaagagccag
accgaaagcagcaagctcgccgcggacgccgtcgctaatctccgcaccatcaccgccttc
tcctcccaagaacggattttgcgcatgttcgaggaggcgcaagccgggccccgccgggag
tgcgtccggcagtcgtggttcgccggcgccgggctggctttctcccagagcctcatgact
tgcacatgggctcttgatttctggtacggaggcaagctgatcgccgacggattcatctcc
gccaaggctttattcgagactttcatgatcctcgtctccaccggccgcgtcatcgctgac
gccggcagtatgaccaccgacctcgccaagggtgccgacgccgtcgcctctgttttcgcg
gtgctagaccgtgtcacagccatcgagcctaacgacccagacggccactgtcccgagcgg
ctcaccggcgacatcgagatccgtggggtcgacttcgcctatccggcacgccccgacgta
gtcatcttccgaggcttctcgctctgcatcgaggccggaaaatcgacggctctcgtgggg
caaagcggctccgggaagtccacggtcataggcctgatcgagcggttctacgacccgctc
agggggacggtcaagatcgacggcagggccgtcaagtcgtacaacctccgggcgctaagg
aagcacatcggcatggtgggacaagagccgacgctgttcgccgggagcatccgggagaac
atcgcctacgggagtgacggagaaatagcgccggcggagatcgaggcggcggcgcgggcg
gcgaacgcacacgagttcatcagcgcgctgaaggaagggtacgagacgcagtgcggcgac
cgggggttgcagctctccggcgggcagaagcagcggatagccatcgcgcgcgcgatcctg
aaggacccagcgatcttgctactggacgaggcgacgagcgcgctggacagccagtcggag
aaggcggtgcagtcggctctggagcggctgatggtgggtcggaccagcgtggtggtggcg
caccgcctcagcaccatccgccactgccacctcatcgccgtgctcgaccagggcgccgtc
gtcgagaaaggaacccacgcctccctcatctccaaggggcccggtggggcctacttcgga
ctcaccgccctgcaaagtggcggcgccgcctcgacgtga
DBGET
integrated database retrieval system
