Zingiber officinale (ginger): 122033733
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Entry
122033733 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase KEG-like
KO
K16279
E3 ubiquitin-protein ligase KEG [EC:
2.7.11.1
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
zof01001
]
122033733
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122033733
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122033733
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
122033733
Protein kinases [BR:
zof01001
]
Serine/threonine kinases: TKL group
RIPK family [OT]
122033733
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122033733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_15
Ank_2
Ank
Ank_4
Pkinase
PK_Tyr_Ser-Thr
Ank_5
Ank_3
zf-RING_UBOX
zf-RING_5
zf-C3HC4
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
122033733
NCBI-ProteinID:
XP_042448831
LinkDB
All DBs
Position
11B:complement(88485580..88503645)
Genome browser
AA seq
1649 aa
AA seq
DB search
MRVPCCSLCHSRYDEEERAPLLLHCGHGFCKACLSKMFAASAGTSLCCPRCRLPTHVGNS
VHALRKNFPILSLLASSTSSPSFDYDFTDDDEEGNGQGEEDYDLDEDDYISHGGGRRGRA
GLSSHAGCCTAASTSAASTTAIDLGLHHELKLLRRLGEGRRVGQEVWSAVLSKGSPSSSQ
NGGSCRHLVAVKRIALTEDTDGVWLKSRLENLRQASMWCRNICTFHGVRQTDGYLCLVMD
RFTSSIQSEMQQNKGRLTLEQILRYGADIARGVAELHAAGIVCMSLKPSNLLLDSNYRAV
VSDYGLPAILKRPMCRKAQSVAEGCPSSLHSCMDCTMLSPHYTAPEAWEPVKKSLNLFWD
DAIGISSESDAWSFGCTLVEMCTGSAPWSGQSTEEIYRSVVKARKLPPQYASIVGVGIPR
DLWKMIGDCLQFKPSKRPTFHSMLAIFLRHLQEIPRSPPASPENEFPRATTTNNTSDPSP
VSVLEDFQCNPNILHQLISEGNFCGVSDLLAKAASNSKSSIGSLLEAQNAEGHTALHLAC
RRGSVELVKTILSFKEADVDILDRDGDPPIVFAVVAGSPECVRALISRSANVSSRLRDGL
GPSLTHICALHGQPECMKELLLAGADPNAVDDEGESVLHIAISKRYSDCAIVILENGGCR
SMRILNSQRKTPLHLCIETWNVEVVKKWVELASQEDIDEAIDIPSSNGTALCMASSLKKT
REIEGRELVRVLLAAGADPTAQDELHYRTALHTAAMINDADLVKIILEAGVDVNIRNAQN
TIPLHVALNRGSNSCVGVLLSAGANCNLQDDDGDNAFHIAADAAKMIRENLNWIVVMLLY
PSPAVDVRNHRGWTLRDFLEGLPREWISEELMEALIDKGVFLSPTIYEVGDWVRFKRSVE
NPTYGWQGANHKSIGFVQTVPNNENLIVSFCTAEGREARVLANEVVKVIPLDRGQHVKMK
SDVKEPRFGWRGQSQDSIGTVLCVDDDGILRVGFPGASRGWRADPAEMERVEEFKVGDWV
RVRPVLTAAIHGMEAVTPGSIGIVHSIRPDSSLLLGLCYLNTPWHCEPEEVEPVEPFRIG
DQVCVKRSVAEPRYSWGGETHHSVGKIIEIESDGLLIIEIPNRSTAWQADPSDMEMVENF
MVGDWVRVKASVPSPKYGWEDVTQNSIGIVHSLEDDGDMGVAFCSRSKPFLCSVADMEKV
QPFELGDKIHVMPTISQPRLGWSNETAATVGTISRIDMDGTLNVKVAGRINLWKVAPGDA
ERLTGFEVGDWVRVKPPTFGASRPTYDRNSIGKESIAVVHSIQDSGYLEVAGCFRKGKLI
THFMDIEKVPCLRVGNYVRFRAGIVEPRWGWRGASPDSRGIISGVHADGEVRVALFGMSG
QWRGDPADLEKEEMFEVGNWVRLKDESGCWKSLKPGSIGVVHGIGYENDMFDGTIHVAFC
GEQEKWVGPATHLAGTARLNVGQRVRIKKCVEQPRFGWSTHSHASIGTISSIDADGKLRI
YTPAGSKAWMIDPAEVDILEEEKVQVGDWVKVREDIVTPTYQWGDVTHASIGVVHRAENG
ELRIAFCFREKLWVCKEEEVEKVTAFKMGDKIKIKPGLVMPRWGWGMETSSSKGEIMGVD
ANGKLRIKFKWRDGRLWRGDPADVVLDDL
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atgagggtgccctgctgctcgctgtgccattcgcgctacgacgaggaggagcgcgcccct
ctgctcctccactgcggccatggcttctgcaaggcctgcctctccaagatgttcgccgcc
tccgccggcacctccctttgctgtccgcgctgccgcctcccgacccacgtcggcaacagc
gtccatgcgctccgcaagaacttccctatcctctccctccttgcctcctcgacctcctcc
ccttccttcgactacgacttcaccgacgatgacgaagaggggaatggtcagggggaggaa
gattatgacctcgacgaagacgattacatttcccacgggggcggccgccgcggcagggct
ggattgtcctcgcacgccggttgctgcaccgctgccagcactagcgcggcctccactacg
gctattgaccttggcctccaccacgaactcaagctgctaaggaggctcggagaagggcgg
cgagtagggcaggaggtgtggtctgctgtgctgtctaagggttccccttcctcgagtcaa
aatggcgggagttgtcgacacctggtggcggtgaagcgcattgcgctcaccgaggacacc
gacggggtgtggttgaagagtcggctggagaacctgcgccaagcttccatgtggtgcagg
aacatttgtacctttcacggggtgagacagacggatggatacttatgcctcgttatggac
aggttcactagctccatccagtcagaaatgcagcagaacaaaggccgtcttacattggag
cagatactcaggtatggggcggatattgctcgtggtgtggcagagctccatgctgctggt
attgtttgcatgagtttgaaaccatcaaaccttcttttggattcaaattaccgtgcggtg
gtctcagattatgggcttccagctattctaaaaagacctatgtgccgaaaagcccaatca
gttgcagagggatgcccttcaagtttgcattcatgcatggattgcacaatgctaagccct
cattacacagctcctgaggcatgggagccagtcaagaaatcactaaatttattttgggat
gatgcaattggtatatcttctgagtctgatgcttggagttttggctgtactcttgtggaa
atgtgtactggatctgccccatggtctggacaaagtaccgaagagatttatcggtctgtt
gtcaaggcacggaaattgccccctcaatatgcaagcatagtcggtgttggaattcctaga
gatctatggaagatgattggtgattgtctgcaattcaaaccttcaaagaggccaactttt
cattcaatgctagcaatctttcttcgacatctacaagaaattcctcggagtcctcctgct
agtccagaaaatgagtttccaagagctactacaaccaataatacctcagacccttctcct
gtatctgtgttagaggattttcagtgtaacccaaatattttacatcaacttatatctgaa
ggaaatttttgtggtgtgagtgatctgcttgcaaaggcagcttcaaacagtaagagctca
attggttctcttctagaagcacaaaatgcagagggacatactgctctgcatttagcttgt
aggcgaggttcagtggagcttgtgaagactattttgtctttcaaagaagctgatgtggat
attttagacagagacggtgatcctccaattgtgtttgctgtggttgctggttctccagag
tgtgttcgtgctttgattagtagatctgctaatgttagttccaggctgagagatggcctt
ggcccttctttaacacatatatgtgctttgcatggccaaccagagtgcatgaaagaatta
ctgttggctggagctgatccaaatgcagtcgatgatgagggcgaatcagttttgcatata
gccatttcaaaacgatactctgattgtgctattgttattctggaaaatggaggatgtaga
tcaatgagaatactgaattcacagagaaaaacgcccttgcatttatgcattgagacatgg
aatgttgaagtggtgaagaagtgggttgagttggcatcacaggaggatattgatgaagcc
atagacattccaagttcaaatggaacagcattgtgcatggcttcttctctcaagaaaact
cgtgaaattgagggccgggaattggttagagtgttgttagctgctggtgcagatcccaca
gcccaagatgaactgcactaccgcacggcattgcatactgcagcaatgatcaatgatgca
gatttagttaagatcattctggaagctggggttgatgtgaacataaggaatgctcaaaat
acaatacctctccatgttgcattgaatagaggttcaaattcatgtgttggtgtgctttta
tctgctggagcaaactgtaatttgcaggatgatgatggtgacaatgccttccacatagca
gctgatgcagcaaaaatgatccgtgaaaatctcaattggattgttgttatgttgctgtac
ccatctcctgctgttgatgtgcgaaaccacaggggttggacgttgcgtgattttcttgag
ggcctgcctcgagaatggatctcggaggagctgatggaagcactcattgacaaaggagtt
tttctttctccaaccatatatgaagttggagactgggtgagattcaaaagaagtgttgaa
aacccaacttacggttggcaaggtgccaatcacaaaagtattggatttgtccaaacagtg
ccgaacaatgaaaatttaattgtgtccttctgcactgcggagggccgagaggcacgtgtt
ttggcaaatgaggttgttaaagtgattcctttagacagaggacagcatgtcaagatgaag
tctgacgttaaagaaccaaggtttggatggcgtggtcaatcacaagacagtattggtact
gtcctctgtgttgatgatgatggtatcttacgggttggttttcctggagcatctagggga
tggagagctgatcctgctgaaatggaaagagttgaagaatttaaggtgggtgactgggtc
cgtgttcgccctgtattaacagccgctattcatggcatggaagctgtaactcctggaagc
attgggattgtgcattccatcaggcctgacagtagcctgttgctaggtctttgttactta
aacactccttggcactgtgaacctgaggaagttgagcctgtggagccattcaggattggt
gatcaagtatgtgtaaagaggtctgttgcagagcctaggtattcttggggtggagagaca
caccatagcgtaggaaagataattgagatagagagtgacggtctacttataattgaaatt
ccaaaccgttcaacagcatggcaagctgatccttctgatatggagatggttgaaaatttt
atggtcggtgactgggtgagagtcaaagcttcagtaccgtctcccaaatatggatgggaa
gatgtgacacagaacagtattgggattgtccatagtctagaagatgatggtgatatgggt
gttgcattctgctctaggagtaagccttttttatgctcagtggcagatatggagaaagta
cagccctttgagctaggagataaaattcatgtgatgccaaccatatctcaaccacgatta
ggatggtcaaatgaaactgctgcaactgttgggacaatatcaagaatagatatggatgga
actttgaacgtcaaagttgctggtaggattaacttgtggaaagtagctccaggtgatgct
gagagacttacaggctttgaagttggagattgggtgcgtgtgaaaccaccaacttttggg
gctagtagacccacatatgaccggaatagcatcggaaaagaaagtatagctgttgttcat
agtatacaagactctggatacttggaggtggctgggtgttttaggaagggaaaattgatc
actcatttcatggacattgagaaggtcccatgccttagagtagggaactatgttcgattt
cgggctggaattgttgagccaagatggggctggagaggcgctagcccagattctagaggc
ataatatctggcgtgcatgcagatggagaagtaagagtggctctttttggcatgtcagga
cagtggagaggagaccctgctgaccttgagaaggaggaaatgtttgaagttggcaattgg
gttaggctgaaggatgaatctggttgctggaagtctctgaaacctggaagcataggtgtg
gttcatggaataggatatgaaaatgatatgttcgatggaactattcatgttgcattttgc
ggtgagcaagaaaagtgggttggacctgctactcatctagcaggaacagctaggctcaat
gtcgggcaacgagtgaggattaagaaatgtgtggagcaacccagatttggttggtccaca
cacagccacgcaagtatcgggactatttcatctattgatgcggatggaaaattaaggata
tatacgcctgcgggatccaaggcgtggatgattgaccctgccgaggtggacatactggag
gaagagaaagtacaagttggagattgggtgaaagtgagggaagacattgttacgccgaca
tatcaatggggagatgttacccatgcgagcataggagtggtgcacagggcagagaatggc
gagttgaggattgctttctgttttagagagaaactatgggtatgcaaagaggaggaggtg
gagaaggtgacagcattcaagatgggggataagataaaaataaaaccaggcttagtaatg
ccaaggtgggggtggggaatggaaacatcctcaagtaagggtgagatcatgggtgtagat
gccaacggaaagttgaggatcaagttcaaatggagagatggaagattgtggagaggggat
ccagcagatgttgttcttgatgacttgtga
DBGET
integrated database retrieval system
