Zingiber officinale (ginger): 122035944
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Entry
122035944 CDS
T08725
Name
(RefSeq) glutamine--tRNA ligase-like
KO
K01886
glutaminyl-tRNA synthetase [EC:
6.1.1.18
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00970
Aminoacyl-tRNA biosynthesis
zof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122035944
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
zof01007
]
122035944
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
122035944
Enzymes [BR:
zof01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.18 glutamine---tRNA ligase
122035944
Amino acid related enzymes [BR:
zof01007
]
Aminoacyl-tRNA synthetase
Class I (A)
122035944
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
122035944
Prokaryotic type
Other AARSs
122035944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
tRNA_synt_1c_R1
tRNA-synt_1c_C
tRNA-synt_1c_C2
tRNA_synt_1c_R2
Motif
Other DBs
NCBI-GeneID:
122035944
NCBI-ProteinID:
XP_042451041
LinkDB
All DBs
Position
1A:complement(140083075..140092140)
Genome browser
AA seq
790 aa
AA seq
DB search
MGTADGEANTLNLFLSIGLDKRTAENVLVNQKVTANLTAVIKEAGVDGCSKTIGNLLYMV
ATKYPANALIHRPSLIQYIVSSKIKNQAQLDAALAFLSTVGPEPFNLNEFEEVCGVGVDV
SIEEIESSVNTVLEENMNAILEQRYRFNVGNLCGQVRKCHPWADAKIVKELIDAKLCVIL
GERTADDDKKPLKKKKEKPVKVVEKANDAIACVPSVEEEVNPYSIFPEPAENFKVHTEIF
FSNGDIWRAHNTKEILEKHLKFTGGKVFTRFPPEPNGYLHIGHAKAMFIDFGLAKERGGS
CYLRFDDTNPEAEKKEYIDHIQEIVQWMGWQPFKVTHTSDYFQELYDLAVELIRRGLAYV
DHQTPEEVKEYREKKMNSPWRDRPIAESLKLFEDMRRGLIEEGKATLRLKQDMQSDNKNM
YDLIAYRIKFAHHPQAGDKWCIYPSYDYSHCIVDSLENVTHSLCTLEFEIRRPSYYWLLL
ALDLYQPYVWEYSRLNISNTVMSKRKLNRLVTEKWVDGWDDPRLMTLAGLRRRGVSSTAI
NSFIRGIGITRSDNSMIRVDRLEHDIREELNKTAPRTMVILHPLKVVITNLDAGSVIDLD
AKMWPEAPSDDSSSYYKVPFTNIIYIEQSDFRLKDSKDYYGLAPGKSVLLRYAFPIKCTE
VIYGDNDTILEIHAEYDPSKKTKPKGVLHWVAQPSPGVEPIKVEVRLFEKLFLSENPAEL
EDWLADLNPCSKELIPEAYAVPSLASAVLGDKFQFERLGYFAVDTDSSPDKLVFNRTITL
RDSYSKSGSK
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgggtacagcggacggtgaggcaaataccctcaacctgttcctatctatcggattggat
aaacggacggcggagaatgttctcgtcaaccaaaaggtcaccgcgaatcttaccgccgtg
atcaaggaggctggtgttgatggatgcagcaagacaatcggaaatcttctttacatggtt
gcgacgaagtacccagctaacgcactaattcatcggcccagccttatccagtatatagtt
tcgtcaaagattaagaaccaagctcagctagatgcagctttagcatttttaagtactgtc
ggacctgaacccttcaatttgaatgaatttgaagaagtttgtggtgtaggagtagatgtt
tcaattgaagagattgagtcatctgttaatactgttcttgaagaaaatatgaatgccata
ttagaacagcgttaccgttttaatgttggcaatctgtgtgggcaagtcagaaaatgtcac
ccatgggctgatgccaaaatcgtgaaggagttgattgatgcgaagctttgtgtgattctt
ggtgagaggacagccgatgatgataaaaaacctctgaaaaagaagaaggaaaagcctgtt
aaagttgtggaaaaagcaaatgatgcaattgcatgtgttccaagtgtggaggaagaagtg
aatccatactcgatatttccagaacctgcagaaaactttaaggttcacacagagatattt
ttcagtaatggagatatctggagagctcataatacgaaggagatcctggaaaaacatctt
aagtttactggtgggaaagttttcacccgcttccctcctgagcctaatggttacctacat
atcggtcatgctaaggcaatgtttattgattttggtttagcaaaagaaagaggaggatca
tgttacttgaggtttgatgatacaaatcctgaagctgaaaagaaagaatacatagatcat
atccaagaaatagtacaatggatgggttggcagcctttcaaggttacccacaccagtgat
tactttcaagagttgtatgatctagcagtggaattgatacgcagaggcctagcatatgtt
gatcatcagacccctgaagaagtaaaggagtatagagagaaaaaaatgaacagcccatgg
agggatagacctattgcagaatcattgaagttgtttgaagacatgagaagaggtttgatt
gaagagggcaaggctacactcagactgaagcaagatatgcagagtgataacaagaatatg
tatgatttgatagcataccgcattaagtttgctcaccatcctcaagcaggtgacaagtgg
tgtatatatcctagttacgattattctcattgcatagtggattcactggaaaatgttaca
cattcactttgtacacttgagtttgagatccgccgaccttcatactactggttactgctt
gctttagacctttaccaaccatacgtatgggagtactcacgtttaaatatttcaaatact
gtcatgtccaaacggaagttaaaccgactggtaacagaaaagtgggtggatggatgggat
gatcctcgtctaatgacattagctgggttgcgacgtcgaggagtctcttcaacagcaatt
aattcttttatcagaggaattggaattactagaagtgataatagtatgatacgtgttgat
cgccttgaacacgacattagagaagaactcaacaaaactgcaccaaggaccatggtgatt
ctacatcctctaaaggtggttatcacaaatcttgatgctggttcagttatagatcttgat
gcaaagatgtggcctgaagctccatcagacgattcttcttcatactacaaggttcccttt
acaaacatcatttatatagagcaatcagattttcgtctcaaggattcgaaagattactat
gggcttgcacctggcaaatctgtcctcctcagatatgcattccctataaagtgcacagaa
gtaatatatggggataacgacactatccttgagattcacgctgagtatgatccttcaaaa
aaaacaaagccaaagggtgttcttcattgggttgctcaaccttcccctggcgttgaaccc
atcaaggtggaggtcaggttgtttgagaaattattcctatccgagaatcctgctgagttg
gaggattggttagcagatctcaatccatgttccaaggagttaattcctgaagcatatgcc
gtcccctctcttgccagtgctgtgttgggcgacaagttccagtttgagagacttggctac
tttgctgttgatacggactcttcaccagataagctggtgttcaacagaaccatcaccctc
agggattcatattccaagtctggaagcaagtaa
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