Zingiber officinale (ginger): 122040768
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Entry
122040768 CDS
T08725
Name
(RefSeq) protein EXPORTIN 1A-like
KO
K14290
exportin-1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03008
Ribosome biogenesis in eukaryotes
zof03013
Nucleocytoplasmic transport
zof03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122040768
03008 Ribosome biogenesis in eukaryotes
122040768
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122040768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122040768
03009 Ribosome biogenesis [BR:
zof03009
]
122040768
03016 Transfer RNA biogenesis [BR:
zof03016
]
122040768
03036 Chromosome and associated proteins [BR:
zof03036
]
122040768
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
122040768
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
122040768
Pre-60S particles
122040768
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
122040768
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
122040768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
CRM1_repeat_3
tRNA-synt_2c
Motif
Other DBs
NCBI-GeneID:
122040768
NCBI-ProteinID:
XP_042456130
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All DBs
Position
2A:13626535..13637300
Genome browser
AA seq
554 aa
AA seq
DB search
MVIRDLLNLCEITKGKDNKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHP
GVQDMACDTFLKIVQKCKRKFVTTQVGENEPFVSELLSSLSITVADLQPHQVHSFYESVG
HMIQAEPLPAKRDEYLRRLMDLPNQKWAEIIGQASRSVDVLKDQDVIRTVLNILQTNTSA
ASSLGTYFFPQISLVFLDMLTVYRMYSELISNSIAEGGPFASKTSFVKLLRSVKRETLKL
IETFIDKAEDQSHIGKQFVPPMMDPVLGDYARNLPDARESEVLSLFATIINKYKIVMMEY
VPRIFEAVFQCTLEMITKNFEDYPEHRLKFFSLLRAIGTHCFQALIQLSSQQLKLVMDSI
IWAFRHTERNIAETGLNLLLELLKNFQVSEFCNQFYRTYFLTIEQEIFAVLTDTFHKPGF
KLHVLVLQHLFCLVDSGALTEPLWDTSTVPYPYSNNTMFVRDYTIKLLGSSFPNMSVAEI
THFVTGLFESKNDPPNFKNHIRDFLVQSKEFSAQDNKDLYAEEAAAQREQERQRMLSIPG
LIAPNELQDEMLDS
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggtcattcgtgatttactgaatctttgtgaaatcacaaaaggaaaagataacaaggct
gttattgcgagtaatatcatgtatgttgtgggacaatatccgaggtttcttcgagcccat
tggaagtttctcaaaacagttgttaataaattatttgagtttatgcatgaaactcaccca
ggtgtccaggacatggcttgtgatacttttctgaaaattgtccagaaatgcaagcgcaaa
tttgtaaccactcaggttggagaaaatgagccattcgtttctgaacttttatctagttta
tccattactgttgcagatcttcagcctcatcaggttcactcattctatgaatctgttggt
catatgattcaagctgaaccccttcctgccaagagagatgaatatctgagaagattgatg
gatctcccaaatcagaaatgggctgaaataattgggcaagcaagtcgcagtgtagatgtc
ctgaaagatcaagatgtcataagaacagttcttaacatcttgcagacaaatactagtgct
gctagttctctgggaacatatttcttcccacaaatttccctggtatttttggacatgctt
accgtctacagaatgtacagtgaattaatatctaacagtattgctgaaggtggtcctttt
gcttcaaaaacatcttttgttaagcttttgcgatctgtaaaacgggagacacttaagctg
attgaaacatttatagacaaagctgaagatcagtcacacattggtaagcagtttgtgccg
cctatgatggatcctgttcttggtgattatgccagaaacttgccagacgctagggaatct
gaagtattatcactctttgcaaccatcataaacaagtataaaattgtgatgatggagtat
gtacctcgcatatttgaagctgtatttcaatgtactcttgagatgatcaccaagaatttt
gaggactatccagagcatcgtcttaagttcttctctttgttacgtgcaattggtacccat
tgtttccaagctttaattcaattatcaagtcagcaattgaaacttgtgatggattctatt
atttgggcttttcgccataccgaaaggaatattgctgagactggccttaatcttctgttg
gagttgttgaagaattttcaggtttcggagttttgtaaccaattctataggacatatttt
ttgacaatcgagcaggagatctttgctgtcttaacagatacattccacaaaccaggcttc
aagctacatgttttagtgcttcagcatttgttttgcttggttgactctggtgcattaacg
gaaccactatgggatacttctacagttccatatccatactcaaacaatacaatgtttgtt
cgagattacaccataaaactattggggtcatcatttccaaatatgtcagttgctgagata
actcattttgtcactggattgtttgagtccaaaaatgatcctccaaattttaagaaccat
atacgagactttctcgtccaatcgaaagagttctctgctcaggataacaaagatctttac
gcagaggaagctgctgcccagagagaacaggaacgccagagaatgttgtccattcccggg
ctcatcgcccctaatgagcttcaggacgagatgttggattcgtag
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