Zingiber officinale (ginger): 122045293
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Entry
122045293 CDS
T08725
Name
(RefSeq) protein EXPORTIN 1A-like
KO
K14290
exportin-1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03008
Ribosome biogenesis in eukaryotes
zof03013
Nucleocytoplasmic transport
zof03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122045293
03008 Ribosome biogenesis in eukaryotes
122045293
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122045293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122045293
03009 Ribosome biogenesis [BR:
zof03009
]
122045293
03016 Transfer RNA biogenesis [BR:
zof03016
]
122045293
03036 Chromosome and associated proteins [BR:
zof03036
]
122045293
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
122045293
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
122045293
Pre-60S particles
122045293
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
122045293
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
122045293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xpo1
CRM1_repeat_2
IBN_N
CRM1_repeat
CRM1_repeat_3
Motif
Other DBs
NCBI-GeneID:
122045293
NCBI-ProteinID:
XP_042461380
LinkDB
All DBs
Position
2B:11724858..11737440
Genome browser
AA seq
541 aa
AA seq
DB search
MAERLRDLSQPIDVPLLDATVGAFYGTGSKEERSAADQILRELQNNPDTWLQVVHILQNS
QNLNTKFFALQVLENVIKYRWNALPAEQRDGIKNYISDVIVQLSSNETSFRKERLYVNKL
NVILVQVLKHEWPARWQSFIPDLVSAAKSSETICENCMAILKLLSEEVFDFSRGEMTQQK
IKELKQSLNSEFQLIHELCLYVLSASQRTELIRATLATLHAFLSWIPLGYIFESPLLEIL
LKFFPMGSYRNLTLQCLTEVAALQFGDFYDAQYVKMYTIFMAQLQTIIPHGTNFAEAYTN
GSSEEQAFIQNLALFFASFFKCHIRVLESAPANRGGLLMGLEYLIGISYVDDTEVFKVCL
DYWNLLVLELFEAHHNLENPTLSASLMGLQTTLMPEMVDGLGSPLLQRRQLYSVPLSKLR
TLMICRMAKPEEVLIVEDENGNIVRETMKDIDVLVQYKIMRETLIYLSHLDHEDTEQQML
KKLNKQLSGEEWSWNNLNTLCWAIGSISGSMMEEQVFLFSMYQYSLDTSLVQTYTASTLE
I
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcggagagattgagggatttaagccagccgatcgacgtgcccctgctcgatgcgacc
gtgggcgcattttacgggacgggatccaaggaagagaggtcagctgcagaccagatactg
cgagaattgcaaaacaaccctgacacctggctacaagtggttcacattctacaaaattca
caaaacttaaataccaagttttttgccctacaggtactagaaaatgtcattaaatacaga
tggaatgccttgccagctgaacaacgggatggaataaagaattacatatctgatgtcatt
gtacagctttctagtaatgaaacctctttccggaaggagcgattgtatgttaataagctt
aatgtcatattagtgcaggtcttaaagcatgagtggccagccagatggcagagcttcatt
cccgatcttgtctcagctgcaaagagcagtgaaacaatttgtgaaaattgtatggctata
ctgaagcttttgagtgaagaggtttttgatttctcaagaggagagatgactcaacaaaaa
ataaaagaactgaagcagtcattaaatagtgaatttcaactcatccatgagttatgctta
tacgtactatcagcctctcaaagaacagagcttatcagggctactttggcaacacttcat
gcctttctatcatggattccacttggctatatatttgaatctccactgctggagatactc
ttaaaattctttcccatgggatcataccggaaccttactcttcagtgtttgacagaggtt
gcggcccttcaatttggcgacttttatgatgcacagtatgtgaagatgtatacaatattt
atggcacaattgcagacaattattcctcatggtacgaattttgcagaagcatacacaaat
ggttctagtgaagagcaggctttcattcaaaaccttgcgctcttttttgcttcatttttc
aagtgtcacatccgagtactggaatcagctcctgcaaatagaggtggattattgatgggc
ctcgagtaccttattggtatttcatatgttgatgacactgaagttttcaaggtttgcttg
gactattggaatttattggtacttgagctgtttgaagcgcatcacaacttggagaaccct
actctttcagcaagcttgatgggtcttcagacgacactcatgcctgagatggttgatggc
cttggttctcctcttcttcagaggcggcaactttattcagttccattgtccaagttaaga
acactcatgatttgtcgtatggctaagccggaagaggttttgattgttgaagatgaaaat
ggaaatatagtccgtgaaactatgaaagacatcgatgtccttgttcagtataagataatg
cgggaaacattaatatatttgtctcaccttgatcatgaggacacagagcaacagatgttg
aagaagttgaacaaacaattgagtggagaagaatggtcctggaacaacttaaacacatta
tgctgggccatcggatccatatcaggatcaatgatggaagaacaggtattccttttcagt
atgtatcagtatagcttagacacatctttggtacaaacgtacactgcaagtactttagaa
atttaa
DBGET
integrated database retrieval system
