Zingiber officinale (ginger): 122047179
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Entry
122047179 CDS
T08725
Name
(RefSeq) phytoene synthase 2, chloroplastic-like isoform X1
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00906
Carotenoid biosynthesis
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
Module
zof_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
122047179
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
zof01006
]
122047179
Enzymes [BR:
zof01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
122047179
Prenyltransferases [BR:
zof01006
]
Terpene biosynthesis
Squalene/phytoene synthase
122047179
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
122047179
NCBI-ProteinID:
XP_042464227
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All DBs
Position
2B:complement(129893637..129896439)
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AA seq
466 aa
AA seq
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METLLLRMVSPADARVGLGFLEAVREGDRSQGKLPAFPAMNHDGEIQRRNRRWSLRSLYA
DSKYACVGFEPEKSSLFPCAASLLTSAGGEIVVSSEQKVYDVVLKQAALVKRQLTSNIAV
DAKKQDTPLPGSLGLLEDAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTD
ELVDGPNASQITPTALDRWESRLEDVFSGQPYDMLDAALSDTVRKYPVDIQARIQLLLRH
CFNGATISNNRCTQLVVVCLDFQPFRDMIEGMRLDLKKSRYKNFSELYLYCYYVAGTVGL
MSVPVMGIAQESKATTESVYSAALALGIANQLTNILRDVGEDASRGRIYLPQDELAQAGL
SDEDIFNGKVTDKWRSFMKDQIKRARVFFQEAEIGVTELNQASRWPVWASLELYRRILDE
IEANDYNNFTKRAYVSKAKKLMALPVAYGRSLVRPSSLRQSNLVKA
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggaaactttgctgctgcggatggtttctcccgcggatgcgcgtgttggactaggattc
ttggaagcagttcgagaaggggatcggtcacagggaaagctgcctgcgtttcctgcaatg
aatcatgacggggagatccagagaaggaatcgaaggtggagcttgcgctcgctctatgct
gattccaagtacgcctgcgtggggtttgagccagaaaagagctcactttttccctgcgcg
gcgagtctgctgacgagcgccggaggggagatcgtggtctcctcggagcagaaggtctat
gacgtagttctgaagcaggccgcactggtgaagaggcagctgacctcgaacattgccgtc
gatgcgaagaagcaggacacgccacttcctggatcactgggcttgttggaggatgcctac
gatcgctgtggagaagtctgcgcagagtatgccaagaccttttacttggggacactgctc
atgactcctgagagaagaaaggctatctgggcaatctatgtgtggtgcaggaggaccgat
gagcttgtagatggtccaaatgcttcacaaatcacacctactgctttagaccgatgggaa
tcgaggctggaggatgtgttttcaggccagccatatgacatgctcgatgcggccctttcc
gataccgttagaaagtaccccgtcgatatccaggcacgcattcaacttttattaaggcat
tgttttaatggagctactatatcaaataaccgatgcacacaacttgttgttgtctgtttg
gattttcagccatttagagacatgattgaaggaatgcgattggatttaaagaaatctaga
tataaaaacttcagcgaactctatctctattgctactacgtcgctggaactgtcggattg
atgagcgttcctgtgatgggcatcgcacaagagtcgaaagcgacaacagagagtgtgtac
agtgcagctttggctttagggattgcaaaccaactgaccaacattcttagggatgttggg
gaagatgctagtagagggaggatttatctgccacaggatgagcttgctcaggctggtctt
tcagatgaggacatttttaatggcaaggtgactgacaaatggaggagtttcatgaaggac
caaatcaagagggcaagagtgttcttccaagaagctgagattggtgtaaccgaactcaat
caagctagtcgttggccggtttgggcttctctagaactgtataggcggatcctcgacgaa
attgaagcgaacgactacaataacttcactaagcgagcttatgttagcaaagcaaagaag
cttatggccctgccggttgcgtatggaagatctctagttaggccatcttctctgaggcag
tcaaacttagtgaaagcatga
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