Zingiber officinale (ginger): 122051106
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Entry
122051106 CDS
T08725
Name
(RefSeq) serine/threonine-protein kinase VPS15-like isoform X1
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
122051106
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
zof01001
]
122051106
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122051106
Enzymes [BR:
zof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
122051106
Protein kinases [BR:
zof01001
]
Serine/threonine kinases: Other
VPS15 family
122051106
Membrane trafficking [BR:
zof04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
122051106
Autophagy
Autophagosome formation proteins
PI3K complex
122051106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
WD40
HEAT
PK_Tyr_Ser-Thr
NBCH_WD40
Cohesin_HEAT
APH
Vac14_Fab1_bd
Cnd3
TCAD9
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
122051106
NCBI-ProteinID:
XP_042467998
LinkDB
All DBs
Position
3A:complement(6872233..6892779)
Genome browser
AA seq
1545 aa
AA seq
DB search
MGNKIARTTQVSASEYYLHDLPSSYNLVLVELLGRGRFFKSILCKHDEGLVLVKVYFKRG
EPLDLREYERRLAQIRDIFQSVQHPHVWPFQFWLETDKAAYLLRQYFFSNLHDRLSTRPF
LSLIEKKWLAFQLLCAVEQSHNKGVCHGDIKCENVLVTSWNWLYLADFASFKPTYIPDDD
PSDFSFFFDTGGRRRCYLAPERFYDHGGESPVVPDAPLKPSMDIFSLGCVIAELFLEGQP
LFELSQLLAYRRGQYDPCQCLEKIQDEGIQKMILHMIQLNPNARLSSQSYLQNYASSIFP
SYFSPSLHKFFSYLVPLDSDARVAAIERAFHKIHAQMMSVRSSDDVILDSSASPKLTDEE
GFQNIKGVTQSMLLARGDARSRSRKSTIPGQVQLVGDITSLLRDVEQINHSVHSDVTQKN
ATILSTNDSETDCTRFSKQSRTLKDQPSNDLQGHKQKDFLFLRNILKGDLDSLIDVYDSQ
TDTYRMPSFPQSGDKNSCDGMVLIASLVCSCIRSVKQPQLRRAGLLLLKTTSLYTDDEDR
LQHVLPYVIAMLSDPAAIVRCAALETLCDILTLVQDFPPSDAMIFPEYIFPMLSMLPDDP
EESVRICYASNISKIALSSYRFLIQAETIAGGGPLGKPTIAQKSQPLIMESPSKQRGYRI
DSQLMQLRRLLAEIVQELVMGPKQTPNVRRALMQDIGHLCYFFGQKHSNDFLLPILPAFL
NDRDEQLQSAFYKHIIFFCYFVGQVSVEEYLLPYIEQALSDEMEVVIVNGLDCLSILCKS
GFLRKRMLLGLIEKVFPLLCYPIYWVRRSAVTFIAASSKSLGPVDSHVYLSPVLLPFLDR
VPTSLSSETSLLSCLKPPVSKVIYHQVLENARSSDMLERQRRIWYNSSTYSNQLETIEHT
RKVSGEVKSNNISVKRESDLQSGKYANSTTLNASLPVVEDVAVRTGTSFQISGSMDIRDS
VYSEKTQFSTFTSPQVTAANTSLCDGPSDGIPLYYVSLDKLASGIGPESSCQWNPKGVAA
SSMRLEPLDKPFGLSNSVPPKLVSSSFLNISTNIKQVQKQADVVSRDSEQSALLTSKFQD
ITVYDALKGSSLNDASQSELSGLSTFARASSVPDIGWKPRGVLVAHLQEHKSSVNDVTVS
NDHTFFISASDDSTVKIWDTRKLEKDISFRSRLTYSLDGCRALCTAMLRGTAQVVVGASD
GTIHLFSVNYISRGFGNVIEKYSGIADIQNRKIGEGAILSVLNCSSIDSSISQTVLFTTQ
RCGVHLWDIRANSDAWTFKAVPDEGYVSSLVMGQCGNWFVSGSSRGVLTLWDLRFLLPVN
SWQYPMVCPVEKLCLLIPPLNSVSAVTRPLVYVAAGSNEVSLWNAENGSCHQVLRVASGE
HEGESTHFSLATERPSRKQSSQLYGKRNINSKYRIDELNEPAPRLQGIRSLLPLPGGDLL
TGCADLTIRYWDHTRPEHSYCVCGPWTKGVGNDGYYDIRSSFGVQIVQQEMNKRSTKLTQ
KTFLSTAATDSAGCHRDSVLSLASLKLSQRVLISSSRDGAIKVWK
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atggggaataagatcgcaaggacgacccaggtgtccgcgtcggagtattacctccacgac
cttccttccagttataatctggtgctagtggagctcctaggccgtggacgcttcttcaaa
tccatactctgcaagcacgacgagggcctagtcctcgtcaaggtctatttcaagcgcggc
gaacccctcgacctcagggaatacgagaggaggttggctcagattagggatatcttccaa
tccgtgcagcatcctcatgtttggccattccaattctggctggaaactgacaaggcggct
tatcttttgaggcaatacttcttcagcaaccttcatgatcggttgagtaccagacccttc
ctcagccttattgagaaaaaatggcttgcatttcagttactttgtgcagtggagcagagt
cacaataaaggagtttgccatggtgacatcaagtgtgagaatgtcctagtcacctcttgg
aattggttatatcttgctgactttgcgtctttcaagccaacatatataccagatgatgac
ccttctgatttttcattcttctttgacacgggtgggagaaggcgatgttatcttgcacct
gagaggttttatgatcatggaggtgagtcacctgttgtaccagatgcaccattaaaacca
tcgatggacattttctccttgggatgtgttattgctgaactttttttggagggacaacca
ttatttgagttatcccagctactggcatatcggcgagggcaatatgacccttgtcagtgc
ctagaaaagatacaagatgaaggtattcagaaaatgatacttcatatgattcagttaaat
ccaaatgcaaggttatcaagtcaaagttacttgcaaaattatgcatcttcaatatttcca
agctatttctcaccatcccttcacaaattcttctcttatttggttccgcttgattcagat
gcaagggttgcagcaattgaaagagcattccataagattcatgcacaaatgatgagtgtc
aggtcatcagatgatgtcattcttgactcatctgcatctcccaaactcacagacgaagaa
ggttttcaaaatattaaaggtgtgactcaaagtatgcttttggctagaggggatgcaaga
agcagatcaaggaagagtacaattccaggccaggttcagcttgttggagatatcacttca
ctcttgagggatgtagaacaaataaatcattctgtgcacagtgatgtaacacagaagaat
gctacaatcttgtctactaatgattctgagactgactgcactagattttctaagcaatca
aggaccttgaaggatcagccatcaaatgatctccaagggcacaagcagaaagattttcta
tttctaagaaacatcttgaaaggtgatctggactctttgatcgatgtttatgatagccag
acagatacataccgcatgccatcttttccacagtcaggtgacaaaaacagttgcgatggc
atggtcctgattgcatcattagtatgttcttgcataagaagtgtgaaacagccacaactc
agaagggctggtctcctcctactgaagaccacttccttgtacactgatgatgaagatcgt
ctacaacatgtccttccatatgttattgcaatgctttctgatccagctgctattgttcgc
tgtgctgctcttgaaacattgtgtgacattttaactcttgtccaagatttccctcctagt
gatgcaatgatttttcctgagtatatatttccaatgctttccatgcttcctgatgatcca
gaggagagtgttagaatttgttatgctagtaatatttctaagattgcgttgtcttcttat
agatttttaattcaggctgagactatagctggtggagggcctctaggtaaaccaactata
gcacaaaaatcacaacctcttattatggaatcaccgagtaagcaacgaggctacagaatt
gacagtcagcttatgcaattaaggagattgttagctgaaattgtgcaagagctggtaatg
ggtccaaagcaaactccaaatgtccgtcgagctcttatgcaggatattggccatctatgt
tacttcttcggtcagaagcatagtaatgatttcctattgcccattcttccagcatttctc
aatgatcgagatgagcagcttcaatcagctttctataaacatataatttttttctgctat
tttgttggccaagtgagtgttgaggaatatcttttaccatacattgagcaggctttaagt
gatgaaatggaggttgtaattgtgaatggtttggattgtttgtccatattatgcaaaagt
ggtttcctacgaaaaaggatgcttcttgggttgattgagaaagttttccccttgttatgt
tatccaatctattgggttagaagatcagccgttactttcattgctgctagtagcaagagt
ttggggccagtagattcccatgtttatctttctccagtcttactcccttttttagatagg
gtgccaacttctttatcttctgaaacatctctactttcatgcctgaagcctccagtctct
aaagtaatataccatcaagttctggaaaatgcaaggagttctgacatgttggaaagacaa
aggaggatatggtataattcatcaacatattcaaatcagttggaaactattgaacacact
aggaaggtttcaggagaagtgaaatccaataatatttctgtcaaaagagaatcagattta
caaagtggaaaatatgccaacagtacaacactgaatgcatctttacctgtcgtggaggat
gttgctgtaagaacagggacatcttttcagatctctggctcaatggatataagagattct
gtttattcggaaaaaacacaattttctacattcacatctccacaggtaacagcagctaat
acttctctttgtgatgggcctagtgatggcattcccttgtactatgttagtctcgataaa
cttgcatctggtattggtcctgaatcttcatgtcaatggaaccctaaaggtgtcgctgct
tcaagcatgcggttggaacctctcgacaagccatttggcttatctaattcagttccaccc
aaactggtttcaagctcttttttaaatatcagcaccaacatcaaacaagttcaaaaacaa
gctgatgttgtatcccgggactctgagcaatctgcacttcttaccagtaagtttcaggat
ataactgtttatgatgctttgaagggaagctcattgaatgacgcctcacagtccgagtta
agtggattatctacctttgcaagagcatcttcagttcctgatataggatggaaaccacgt
ggagttctggttgcacatctccaggagcacaaatcttctgtgaacgatgtaactgtatca
aatgaccacacttttttcataagtgcatctgatgattcgactgttaagatatgggatact
aggaaattggaaaaggacatctcttttaggtctaggttaacatattctctagatggttgt
cgagctttatgtacagctatgcttcgaggcactgcccaagtggttgttggtgcaagcgat
ggaacgattcatttattttctgtaaattacataagtagagggttcggtaatgtaatagaa
aagtattctggtattgctgatatccagaacagaaaaattggtgaaggtgcgattcttagt
gtgttgaactgctctagtatagatagtagcattagtcagactgttttattcaccacccag
agatgtggagttcatctctgggatataagggcaaattctgatgcctggacatttaaagct
gttccagatgaaggatatgtctcatctcttgtaatgggtcaatgtggaaactggtttgta
tctggttcttctagaggtgttctgacactctgggatctcaggttccttctgccagtgaac
tcatggcaatatcccatggtttgccctgtggagaagctatgcttactaattccaccattg
aactcagtgtctgctgtgacaaggccattagtttatgttgctgctggaagtaatgaagtc
tccctctggaatgctgagaacggaagttgtcatcaggtgttgagagtagccagtggtgag
cacgaaggtgaatcaacccatttttctctagcgacagagaggccttctagaaagcaaagt
tctcaattatatgggaaaagaaatatcaattccaaatataggattgacgagttgaatgaa
ccagcccctcgtcttcagggtattcgatcattgcttccattacctgggggagatctgttg
actggatgtgcagatttgacaatacgttactgggatcatacacgtcctgagcatagttat
tgtgtctgtggtccatggacaaaaggcgtaggaaatgatgggtactatgatattaggtct
agctttggtgtgcaaattgttcagcaggagatgaacaagcggtcgactaagttgactcag
aagacattcctttccacggcagccactgattctgctgggtgtcaccgtgactctgtgctt
tcgttagcatctctcaagttgagccaaagggttttgatctcaagtagcagagatggtgca
atcaaggtatggaaatag
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integrated database retrieval system
