KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: bpe00010 bpe01200 bpe01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: bpe00010 bpe01200 bpe01230 bpe01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: bpe00010 bpe00020 bpe01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: bpe00010 bpe00020 bpe00620 bpe00785 bpe01200 bpe01210 bpe01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: bpe00020 bpe01200 bpe01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: bpe00020 bpe01200 bpe01210 bpe01230 bpe01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: bpe00020 bpe01200 bpe01210 bpe01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: bpe00030 bpe01200 bpe01100 bpe01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: bpe00030 bpe01200 bpe01100 bpe01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: bpe00030 bpe01200 bpe01230 bpe01100 bpe01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: bpe00030 bpe00230 bpe01200 bpe01230 bpe01100]
Other carbohydrate metabolism
M00014 Glucuronate pathway (uronate pathway) [PATH: bpe00040 bpe01100]
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH: bpe00040 bpe00030 bpe01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH: bpe00052 bpe01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH: bpe00500 bpe01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH: bpe00500 bpe01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH: bpe00520 bpe01250 bpe01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH: bpe00520 bpe00052 bpe01250 bpe01100]
M00892 UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH: bpe00520 bpe01250 bpe01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH: bpe00520 bpe01250 bpe01100]
M00012 Glyoxylate cycle [PATH: bpe00630 bpe01200 bpe01100 bpe01110]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH: bpe00280 bpe00630 bpe00640 bpe01200 bpe01100]
M00130 Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4 [PATH: bpe00562 bpe01100]
M00131 Inositol phosphate metabolism, Ins(1,3,4,5)P4 => Ins(1,3,4)P3 => myo-inositol [PATH: bpe00562 bpe01100]
M00132 Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH: bpe00562 bpe01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
M00101 Cholesterol biosynthesis, FPP => cholesterol [PATH: bpe01100]
M00103 Cholecalciferol biosynthesis [PATH: bpe01100]
M00107 Steroid hormone biosynthesis, cholesterol => pregnenolone => progesterone [PATH: bpe01100]
M00109 C21-Steroid hormone biosynthesis, progesterone => cortisol/cortisone [PATH: bpe01100]
M00110 C19/C18-Steroid hormone biosynthesis, pregnenolone => androstenedione => estrone [PATH: bpe01100]
M00976 C19-Steroid hormone biosynthesis, pregnenolone => testosterone => dihydrotestosterone [PATH: bpe01100]
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
M00022 Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH: bpe00400 bpe01230 bpe01100 bpe01110]
M00023 Tryptophan biosynthesis, chorismate => tryptophan [PATH: bpe00400 bpe01230 bpe01100 bpe01110]
M00024 Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH: bpe00400 bpe01230 bpe01100 bpe01110]
M00025 Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH: bpe00400 bpe01230 bpe01100]
M00042 Catecholamine biosynthesis, tyrosine => dopamine => noradrenaline => adrenaline [PATH: bpe00350 bpe01100]
M00043 Thyroid hormone biosynthesis, tyrosine => triiodothyronine/thyroxine [PATH: bpe00350 bpe01100]
M00044 Tyrosine degradation, tyrosine => homogentisate [PATH: bpe00350 bpe01100]
M00037 Melatonin biosynthesis, animals, tryptophan => serotonin => melatonin [PATH: bpe00380 bpe01100]
M00038 Tryptophan metabolism, tryptophan => kynurenine => 2-aminomuconate [PATH: bpe00380 bpe01100]
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
M00055 N-glycan precursor biosynthesis [PATH: bpe01100]
M00073 N-glycan precursor trimming [PATH: bpe01100]
M00075 N-glycan biosynthesis, complex type [PATH: bpe01100]
M00872 O-glycan biosynthesis, mannose type (core M3) [PATH: bpe01100]
M00070 Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer [PATH: bpe01100]
M00071 Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer [PATH: bpe01100]
M00069 Glycosphingolipid biosynthesis, ganglio series, LacCer => GT3 [PATH: bpe01100]
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:bpe00730 bpe01100]
M00912 NAD biosynthesis, tryptophan => quinolinate => NAD [PATH:bpe00380 bpe00760 bpe01240 bpe01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:bpe00770 bpe01240 bpe01100 bpe01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:bpe00770 bpe01240 bpe01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:bpe00780 bpe01240 bpe01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:bpe00780 bpe01240 bpe01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:bpe00785 bpe01240 bpe01100]
M00882 Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:bpe00785 bpe01240 bpe01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:bpe00785 bpe01240 bpe01100]
M00842 Tetrahydrobiopterin biosynthesis, GTP => BH4 [PATH:bpe00790 bpe01240 bpe01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:bpe00790 bpe01240 bpe01100]
M00140 C1-unit interconversion, prokaryotes [PATH:bpe00670 bpe01240 bpe01100]
M00141 C1-unit interconversion, eukaryotes [PATH:bpe00670 bpe01240 bpe01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:bpe00860 bpe01240 bpe01100 bpe01110]
M00868 Heme biosynthesis, animals and fungi, glycine => heme [PATH:bpe00860 bpe01240 bpe01100 bpe01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:bpe00860 bpe01240 bpe01100 bpe01110]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:bpe00860 bpe01240 bpe01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:bpe00130 bpe01240 bpe01100 bpe01110]
M00128 Ubiquinone biosynthesis, eukaryotes, 4-hydroxybenzoate + polyprenyl-PP => ubiquinol [PATH:bpe00130 bpe01240 bpe01100]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
Plant pathogenicity
Symbiosis
Module set
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