KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: cha00010 cha01200 cha01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: cha00010 cha01200 cha01230 cha01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: cha00010 cha00020 cha01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: cha00010 cha00020 cha00620 cha01200 cha01210 cha01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: cha00020 cha01200 cha01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: cha00020 cha01200 cha01210 cha01230 cha01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: cha00020 cha01200 cha01210 cha01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: cha00030 cha01200 cha01100 cha01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: cha00030 cha01200 cha01100 cha01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: cha00030 cha01200 cha01230 cha01100 cha01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: cha00030 cha00230 cha01200 cha01230 cha01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: cha00030 cha01200 cha01100 cha01120]
Other carbohydrate metabolism
M00014 Glucuronate pathway (uronate pathway) [PATH: cha00040 cha01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH: cha00500 cha01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH: cha00500 cha01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH: cha00520 cha01250 cha01100]
M00892 UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH: cha00520 cha01250 cha01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH: cha00520 cha01250 cha01100]
M00012 Glyoxylate cycle [PATH: cha00630 cha01200 cha01100 cha01110]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH: cha00280 cha00630 cha00640 cha01200 cha01100]
M00130 Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4 [PATH: cha01100]
M00132 Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH: cha01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
M00101 Cholesterol biosynthesis, FPP => cholesterol [PATH: cha01100]
M00103 Cholecalciferol biosynthesis [PATH: cha01100]
M00107 Steroid hormone biosynthesis, cholesterol => pregnenolone => progesterone [PATH: cha01100]
M00109 C21-Steroid hormone biosynthesis, progesterone => cortisol/cortisone [PATH: cha01100]
M00110 C19/C18-Steroid hormone biosynthesis, pregnenolone => androstenedione => estrone [PATH: cha01100]
M00976 C19-Steroid hormone biosynthesis, pregnenolone => testosterone => dihydrotestosterone [PATH: cha01100]
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
M00022 Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH: cha00400 cha01230 cha01100 cha01110]
M00023 Tryptophan biosynthesis, chorismate => tryptophan [PATH: cha00400 cha01230 cha01100 cha01110]
M00024 Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH: cha00400 cha01230 cha01100 cha01110]
M00025 Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH: cha00400 cha01230 cha01100]
M00042 Catecholamine biosynthesis, tyrosine => dopamine => noradrenaline => adrenaline [PATH: cha00350 cha01100]
M00043 Thyroid hormone biosynthesis, tyrosine => triiodothyronine/thyroxine [PATH: cha00350 cha01100]
M00044 Tyrosine degradation, tyrosine => homogentisate [PATH: cha00350 cha01100]
M00533 Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH: cha00350 cha01100 cha01120]
M00037 Melatonin biosynthesis, animals, tryptophan => serotonin => melatonin [PATH: cha00380 cha01100]
M00038 Tryptophan metabolism, tryptophan => kynurenine => 2-aminomuconate [PATH: cha00380 cha01100]
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
M00055 N-glycan precursor biosynthesis [PATH: cha01100]
M00073 N-glycan precursor trimming [PATH: cha01100]
M00075 N-glycan biosynthesis, complex type [PATH: cha01100]
M00872 O-glycan biosynthesis, mannose type (core M3) [PATH: cha01100]
M00070 Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer [PATH: cha01100]
M00071 Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer [PATH: cha01100]
M00069 Glycosphingolipid biosynthesis, ganglio series, LacCer => GT3 [PATH: cha01100]
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:cha00750 cha01240 cha01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:cha00760 cha01240 cha01100]
M00912 NAD biosynthesis, tryptophan => quinolinate => NAD [PATH:cha00380 cha00760 cha01240 cha01100]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:cha00770 cha01240 cha01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:cha00780 cha01240 cha01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:cha00780 cha01240 cha01100]
M00577 Biotin biosynthesis, BioW pathway, pimelate => pimeloyl-CoA => biotin [PATH:cha00780 cha01240 cha01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:cha01240 cha01100]
M00882 Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:cha01240 cha01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:cha01240 cha01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:cha00790 cha00670 cha01240 cha01100]
M00842 Tetrahydrobiopterin biosynthesis, GTP => BH4 [PATH:cha00790 cha01240 cha01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:cha00790 cha01240 cha01100]
M00140 C1-unit interconversion, prokaryotes [PATH:cha00670 cha01240 cha01100]
M00141 C1-unit interconversion, eukaryotes [PATH:cha00670 cha01240 cha01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:cha00860 cha01240 cha01100 cha01110]
M00868 Heme biosynthesis, animals and fungi, glycine => heme [PATH:cha00860 cha01240 cha01100 cha01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:cha00860 cha01240 cha01100 cha01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:cha00860 cha01240 cha01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:cha00860 cha01240 cha01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:cha00130 cha01240 cha01100 cha01110]
M00128 Ubiquinone biosynthesis, eukaryotes, 4-hydroxybenzoate + polyprenyl-PP => ubiquinol [PATH:cha00130 cha01240 cha01100]
M00931 Menaquinone biosynthesis, modified futalosine pathway [PATH:cha00130 cha01240 cha01100]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00642 Multidrug resistance, efflux pump MexJK-OprM
Plant pathogenicity
Symbiosis
Module set
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