KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: mce00010 mce01200 mce01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: mce00010 mce01200 mce01230 mce01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: mce00010 mce00020 mce01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: mce00010 mce00020 mce00620 mce00785 mce01200 mce01210 mce01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: mce00020 mce01200 mce01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: mce00020 mce01200 mce01210 mce01230 mce01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: mce00020 mce01200 mce01210 mce01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: mce00030 mce01200 mce01100 mce01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: mce00030 mce01200 mce01100 mce01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: mce00030 mce01200 mce01230 mce01100 mce01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: mce00030 mce00230 mce01200 mce01230 mce01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: mce00030 mce01200 mce01100 mce01120]
Other carbohydrate metabolism
M00014 Glucuronate pathway (uronate pathway) [PATH: mce00040 mce01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH: mce00040 mce00030 mce01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH: mce00052 mce01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH: mce00500 mce01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH: mce00500 mce01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH: mce00520 mce01250 mce01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH: mce00520 mce00052 mce01250 mce01100]
M00892 UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH: mce00520 mce01250 mce01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH: mce00520 mce01250 mce01100]
M00012 Glyoxylate cycle [PATH: mce00630 mce01200 mce01100 mce01110]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH: mce00280 mce00630 mce00640 mce01200 mce01100]
M00130 Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4 [PATH: mce00562 mce01100]
M00131 Inositol phosphate metabolism, Ins(1,3,4,5)P4 => Ins(1,3,4)P3 => myo-inositol [PATH: mce00562 mce01100]
M00132 Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH: mce00562 mce01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
M00101 Cholesterol biosynthesis, FPP => cholesterol [PATH: mce00100 mce01100]
M00103 Cholecalciferol biosynthesis [PATH: mce00100 mce01100]
M00107 Steroid hormone biosynthesis, cholesterol => pregnenolone => progesterone [PATH: mce01100]
M00109 C21-Steroid hormone biosynthesis, progesterone => cortisol/cortisone [PATH: mce01100]
M00110 C19/C18-Steroid hormone biosynthesis, pregnenolone => androstenedione => estrone [PATH: mce01100]
M00976 C19-Steroid hormone biosynthesis, pregnenolone => testosterone => dihydrotestosterone [PATH: mce01100]
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
M00022 Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH: mce00400 mce01230 mce01100 mce01110]
M00023 Tryptophan biosynthesis, chorismate => tryptophan [PATH: mce00400 mce01230 mce01100 mce01110]
M00024 Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH: mce00400 mce01230 mce01100 mce01110]
M00025 Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH: mce00400 mce01230 mce01100]
M00042 Catecholamine biosynthesis, tyrosine => dopamine => noradrenaline => adrenaline [PATH: mce00350 mce01100]
M00043 Thyroid hormone biosynthesis, tyrosine => triiodothyronine/thyroxine [PATH: mce00350 mce01100]
M00044 Tyrosine degradation, tyrosine => homogentisate [PATH: mce00350 mce01100]
M00037 Melatonin biosynthesis, animals, tryptophan => serotonin => melatonin [PATH: mce00380 mce01100]
M00038 Tryptophan metabolism, tryptophan => kynurenine => 2-aminomuconate [PATH: mce00380 mce01100]
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:mce00750 mce01240 mce01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:mce00750 mce01240 mce01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:mce00760 mce01240 mce01100]
M00912 NAD biosynthesis, tryptophan => quinolinate => NAD [PATH:mce00380 mce00760 mce01240 mce01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:mce00770 mce01240 mce01100 mce01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:mce00770 mce01240 mce01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:mce00780 mce01240 mce01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:mce00780 mce01240 mce01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:mce00785 mce01240 mce01100]
M00882 Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:mce00785 mce01240 mce01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:mce00785 mce01240 mce01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:mce00790 mce00670 mce01240 mce01100]
M00842 Tetrahydrobiopterin biosynthesis, GTP => BH4 [PATH:mce00790 mce01240 mce01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:mce00790 mce01240 mce01100]
M00140 C1-unit interconversion, prokaryotes [PATH:mce00670 mce01240 mce01100]
M00141 C1-unit interconversion, eukaryotes [PATH:mce00670 mce01240 mce01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:mce00860 mce01240 mce01100 mce01110]
M00868 Heme biosynthesis, animals and fungi, glycine => heme [PATH:mce00860 mce01240 mce01100 mce01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:mce00860 mce01240 mce01100 mce01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:mce00860 mce01240 mce01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:mce00860 mce01240 mce01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:mce00130 mce01240 mce01100 mce01110]
M00128 Ubiquinone biosynthesis, eukaryotes, 4-hydroxybenzoate + polyprenyl-PP => ubiquinol [PATH:mce00130 mce01240 mce01100]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00627 beta-Lactam resistance, Bla system [PATH:mce01501]
M00642 Multidrug resistance, efflux pump MexJK-OprM
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00616 Sulfate-sulfur assimilation
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