KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00002 Glycolysis, core module involving three-carbon compounds [PATH:paeo00010 paeo01200 paeo01230 paeo01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH:paeo00010 paeo00020 paeo01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:paeo00010 paeo00020 paeo00620 paeo00785 paeo01200 paeo01210 paeo01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH:paeo00020 paeo01200 paeo01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:paeo00020 paeo01200 paeo01210 paeo01230 paeo01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:paeo00020 paeo01200 paeo01210 paeo01100]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:paeo00030 paeo01200 paeo01230 paeo01100 paeo01120]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:paeo00030 paeo01200 paeo01100 paeo01120]
Other carbohydrate metabolism
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:paeo00740 paeo01240 paeo01100 paeo01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:paeo00750 paeo01240 paeo01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:paeo00760 paeo01240 paeo01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:paeo00770 paeo01240 paeo01100 paeo01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:paeo00770 paeo01240 paeo01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:paeo00780 paeo01240 paeo01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:paeo00780 paeo01240 paeo01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:paeo00785 paeo01240 paeo01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:paeo00790 paeo00670 paeo01240 paeo01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:paeo00790 paeo01240 paeo01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:paeo00860 paeo01240 paeo01100 paeo01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:paeo00860 paeo01240 paeo01100 paeo01110]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:paeo00860 paeo01240 paeo01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:paeo00130 paeo01240 paeo01100 paeo01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00745 Imipenem resistance, repression of porin OprD
M00718 Multidrug resistance, efflux pump MexAB-OprM
M00639 Multidrug resistance, efflux pump MexCD-OprJ
M00642 Multidrug resistance, efflux pump MexJK-OprM
M00643 Multidrug resistance, efflux pump MexXY-OprM
M00769 Multidrug resistance, efflux pump MexPQ-OpmE
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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