KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: pho00010 pho01200 pho01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: pho00010 pho01200 pho01230 pho01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: pho00010 pho00020 pho01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: pho00010 pho00020 pho00620 pho00785 pho01200 pho01210 pho01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: pho00020 pho01200 pho01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: pho00020 pho01200 pho01210 pho01230 pho01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: pho00020 pho01200 pho01210 pho01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: pho00030 pho01200 pho01100 pho01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: pho00030 pho01200 pho01100 pho01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: pho00030 pho01200 pho01230 pho01100 pho01120]
M00580 Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH: pho00030 pho01200 pho01230 pho01100 pho01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: pho00030 pho00230 pho01200 pho01230 pho01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: pho00030 pho01200 pho01100 pho01120]
Other carbohydrate metabolism
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:pho00052 pho01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:pho00500 pho01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:pho00500 pho01100 pho01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pho00520 pho01250 pho01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:pho00520 pho00052 pho01250 pho01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pho00520 pho01250 pho01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:pho00520 pho01100]
M00968 Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate [PATH:pho00030 pho00230 pho00240 pho00630 pho01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
M00045 Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:pho01100]
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:pho00730 pho01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pho00740 pho01240 pho01100 pho01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:pho00750 pho01240 pho01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:pho00750 pho01240 pho01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pho00760 pho01240 pho01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:pho00770 pho01240 pho01100 pho01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:pho00770 pho01240 pho01100]
M00914 Coenzyme A biosynthesis, archaea, 2-oxoisovalerate => 4-phosphopantoate => CoA [PATH:pho00770 pho01240 pho01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:pho00780 pho01240 pho01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pho00780 pho01240 pho01100]
M00950 Biotin biosynthesis, BioU pathway, pimeloyl-ACP/CoA => biotin [PATH:pho00780 pho01240 pho01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pho00785 pho01240 pho01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:pho00790 pho00670 pho01240 pho01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pho00790 pho01240 pho01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:pho00860 pho01240 pho01100 pho01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pho00860 pho01240 pho01100 pho01110]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pho00860 pho01240 pho01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pho01240 pho01100 pho01110]
M00112 Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol [PATH:pho01240 pho01100 pho01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00745 Imipenem resistance, repression of porin OprD
M00641 Multidrug resistance, efflux pump MexEF-OprN
M00642 Multidrug resistance, efflux pump MexJK-OprM
Plant pathogenicity
Symbiosis
Module set
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