KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00002 Glycolysis, core module involving three-carbon compounds [PATH:pke00010 pke01200 pke01230 pke01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pke00010 pke00020 pke01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pke00010 pke00020 pke00620 pke00785 pke01200 pke01210 pke01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH:pke00020 pke01200 pke01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pke00020 pke01200 pke01210 pke01230 pke01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pke00020 pke01200 pke01210 pke01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pke00030 pke01200 pke01100 pke01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pke00030 pke01200 pke01100 pke01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pke00030 pke01200 pke01230 pke01100 pke01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH:pke00030 pke00230 pke01200 pke01230 pke01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pke00030 pke01200 pke01100 pke01120]
Other carbohydrate metabolism
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pke00740 pke01240 pke01100 pke01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:pke00750 pke01240 pke01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pke00760 pke01240 pke01100]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:pke00770 pke01240 pke01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:pke00780 pke01240 pke01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pke00780 pke01240 pke01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pke00785 pke01240 pke01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:pke00790 pke00670 pke01240 pke01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pke00790 pke01240 pke01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:pke00860 pke01240 pke01100 pke01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pke00860 pke01240 pke01100 pke01110]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pke00860 pke01240 pke01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pke00130 pke01240 pke01100 pke01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00745 Imipenem resistance, repression of porin OprD
M00639 Multidrug resistance, efflux pump MexCD-OprJ
M00641 Multidrug resistance, efflux pump MexEF-OprN
M00642 Multidrug resistance, efflux pump MexJK-OprM
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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