KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00002 Glycolysis, core module involving three-carbon compounds [PATH:pnb00010 pnb01200 pnb01230 pnb01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pnb00010 pnb00020 pnb01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pnb00010 pnb00020 pnb00620 pnb00785 pnb01200 pnb01210 pnb01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH:pnb00020 pnb01200 pnb01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pnb00020 pnb01200 pnb01210 pnb01230 pnb01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pnb00020 pnb01200 pnb01210 pnb01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pnb00030 pnb01200 pnb01100 pnb01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pnb00030 pnb01200 pnb01100 pnb01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pnb00030 pnb01200 pnb01230 pnb01100 pnb01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH:pnb00030 pnb00230 pnb01200 pnb01230 pnb01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pnb00030 pnb01200 pnb01100 pnb01120]
Other carbohydrate metabolism
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pnb00740 pnb01240 pnb01100 pnb01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:pnb00750 pnb01240 pnb01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pnb00760 pnb01240 pnb01100]
M00622 Nicotinate degradation, nicotinate => fumarate [PATH:pnb00760 pnb01100 pnb01120]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:pnb00770 pnb01240 pnb01100 pnb01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:pnb00770 pnb01240 pnb01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:pnb00780 pnb01240 pnb01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pnb00780 pnb01240 pnb01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pnb00785 pnb01240 pnb01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:pnb00790 pnb00670 pnb01240 pnb01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pnb00790 pnb01240 pnb01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:pnb00860 pnb01240 pnb01100 pnb01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pnb00860 pnb01240 pnb01100 pnb01110]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pnb00860 pnb01240 pnb01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pnb00130 pnb01240 pnb01100 pnb01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00745 Imipenem resistance, repression of porin OprD
M00641 Multidrug resistance, efflux pump MexEF-OprN
M00642 Multidrug resistance, efflux pump MexJK-OprM
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00616 Sulfate-sulfur assimilation
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