KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: scol00010 scol01200 scol01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: scol00010 scol01200 scol01230 scol01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: scol00010 scol00020 scol01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: scol00010 scol00020 scol00620 scol00785 scol01200 scol01210 scol01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: scol00020 scol01200 scol01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: scol00020 scol01200 scol01210 scol01230 scol01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: scol00020 scol01200 scol01210 scol01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: scol00030 scol01200 scol01100 scol01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: scol00030 scol01200 scol01100 scol01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: scol00030 scol01200 scol01230 scol01100 scol01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: scol00030 scol00230 scol01200 scol01230 scol01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: scol00030 scol01200 scol01100 scol01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:scol00040 scol00030 scol01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:scol00040 scol00030 scol01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:scol00052 scol01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:scol00052 scol01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:scol00500 scol01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:scol00500 scol01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:scol00500 scol01100 scol01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:scol00520 scol01250 scol01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:scol00520 scol00052 scol01250 scol01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:scol00520 scol01250 scol01100]
M00012 Glyoxylate cycle [PATH:scol00630 scol01200 scol01100 scol01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: scol00730 scol01240 scol01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: scol00730 scol01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: scol00740 scol01240 scol01100 scol01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: scol00750 scol01240 scol01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: scol00760 scol01240 scol01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: scol00770 scol01240 scol01100 scol01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: scol00770 scol01240 scol01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: scol00780 scol01240 scol01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: scol00780 scol01240 scol01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: scol00785 scol01240 scol01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: scol00790 scol00670 scol01240 scol01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: scol00790 scol01240 scol01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: scol00860 scol01240 scol01100 scol01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: scol00860 scol01240 scol01100 scol01110]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: scol00130 scol01240 scol01100 scol01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00696 Multidrug resistance, efflux pump AcrEF-TolC
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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