KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: sek00010 sek01200 sek01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: sek00010 sek01200 sek01230 sek01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: sek00010 sek00020 sek01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: sek00010 sek00020 sek00620 sek00785 sek01200 sek01210 sek01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: sek00020 sek01200 sek01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: sek00020 sek01200 sek01210 sek01230 sek01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: sek00020 sek01200 sek01210 sek01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: sek00030 sek01200 sek01100 sek01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: sek00030 sek01200 sek01100 sek01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: sek00030 sek01200 sek01230 sek01100 sek01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: sek00030 sek00230 sek01200 sek01230 sek01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: sek00030 sek01200 sek01100 sek01120]
Other carbohydrate metabolism
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:sek00040 sek00030 sek01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:sek00052 sek01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:sek00053 sek01100 sek01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:sek00500 sek01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:sek00500 sek01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:sek00500 sek01100 sek01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:sek00520 sek01250 sek01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:sek00520 sek00052 sek01250 sek01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:sek00520 sek01250 sek01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:sek00520 sek01100]
M00012 Glyoxylate cycle [PATH:sek00630 sek01200 sek01100 sek01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: sek00730 sek01240 sek01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: sek00730 sek01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: sek00740 sek01240 sek01100 sek01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: sek00750 sek01240 sek01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: sek00760 sek01240 sek01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: sek00770 sek01240 sek01100 sek01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: sek00770 sek01240 sek01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: sek00780 sek01240 sek01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: sek00780 sek01240 sek01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: sek00785 sek01240 sek01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: sek00790 sek00670 sek01240 sek01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: sek00790 sek01240 sek01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: sek00860 sek01240 sek01100 sek01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: sek00860 sek01240 sek01100 sek01110]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: sek00860 sek01240 sek01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: sek00130 sek01240 sek01100 sek01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: sek00130 sek01240 sek01100 sek01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
M00856 Salmonella enterica pathogenicity signature, typhoid toxin
Drug resistance
M00744 Cationic antimicrobial peptide (CAMP) resistance, protease PgtE
M00696 Multidrug resistance, efflux pump AcrEF-TolC
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00616 Sulfate-sulfur assimilation
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