| Entry | T05658 |
| Org code | pagh |
| Name | Planktothrix agardhii NIES-204 |
| Category | Type strain |
| Annotation | yes |
| Taxonomy | TAX: 282423 |
| Lineage | Bacteria; Bacillati; Cyanobacteriota/Melainabacteria group; Cyanobacteriota; Cyanophyceae; Oscillatoriophycideae; Oscillatoriales; Microcoleaceae; Planktothrix; Planktothrix agardhii |
| Brite | KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611] |
| Data source | GenBank (Assembly: GCA_003609755.1 Complete Genome)
BioProject: 448694 |
| Keywords | Photosynthesis |
| Comment | Isolated from Lake Kasumigaura, Japan, which frequently experiences cyanobacterial blooms, in 1983.
|
| Chromosome | Circular |
| Sequence | GB: AP017991 |
| Length | 4780238 |
| Plasmid | plasmid1; Circular |
| Sequence | GB: AP017992 |
| Length | 117686 |
| Plasmid | plasmid2; Circular |
| Sequence | GB: AP017993 |
| Length | 99115 |
| Plasmid | plasmid3; Circular |
| Sequence | GB: AP017994 |
| Length | 52365 |
| Plasmid | plasmid4; Circular |
| Sequence | GB: AP017995 |
| Length | 34730 |
| Statistics | Number of nucleotides: 5084134
Number of protein genes: 4492
Number of RNA genes: 55
|
| Created | 2018 |
| Reference | PMID: 33526179 |
| Authors | Shimura Y, Fujisawa T, Hirose Y, Misawa N, Kanesaki Y, Nakamura Y, Kawachi M |
| Title | Complete sequence and structure of the genome of the harmful algal bloom-forming cyanobacterium Planktothrix agardhii NIES-204(T) and detailed analysis of secondary metabolite gene clusters. |
| Journal | Harmful Algae 101:101942 (2021)
DOI: 10.1016/j.hal.2020.101942 |
Planktothrix agardhii