Agaricus bisporus var. bisporus H97: AGABI2DRAFT118070
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Entry
AGABI2DRAFT118070 CDS
T03140
Symbol
AGABI2DRAFT_118070
Name
(RefSeq) hypothetical protein
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
abv
Agaricus bisporus var. bisporus H97
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
abv01009
]
AGABI2DRAFT118070 (AGABI2DRAFT_118070)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abv03019
]
AGABI2DRAFT118070 (AGABI2DRAFT_118070)
04131 Membrane trafficking [BR:
abv04131
]
AGABI2DRAFT118070 (AGABI2DRAFT_118070)
03036 Chromosome and associated proteins [BR:
abv03036
]
AGABI2DRAFT118070 (AGABI2DRAFT_118070)
Enzymes [BR:
abv01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
AGABI2DRAFT118070 (AGABI2DRAFT_118070)
Protein phosphatases and associated proteins [BR:
abv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
AGABI2DRAFT118070 (AGABI2DRAFT_118070)
Messenger RNA biogenesis [BR:
abv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
AGABI2DRAFT118070 (AGABI2DRAFT_118070)
Membrane trafficking [BR:
abv04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
AGABI2DRAFT118070 (AGABI2DRAFT_118070)
Chromosome and associated proteins [BR:
abv03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
AGABI2DRAFT118070 (AGABI2DRAFT_118070)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Arb2
Motif
Other DBs
NCBI-GeneID:
18077056
NCBI-ProteinID:
XP_006461150
JGI:
Agabi_varbisH97_2_118070
LinkDB
All DBs
Position
Unknown
AA seq
707 aa
AA seq
DB search
MDEGLHWDYSTAYLVVQKFDALFDTEVDSKHELVAGLGTEYSSPFEPQEVEYSDAMEVDN
SAKDVTQNAVIRPRALSVPFKPPVANYTVGYVYSSEMTTHLKLGDDPHPEQPQRIVRIWK
MLSDYHYIKRMLWLPIRPVTREEALLVHTEDHWDKVQAIQYMTDQQIVDSEAYYEQLSLY
VMAGTTRAALLSCGGVIEAALAVAQGRLKKTLAIVRPPGHHAEPDEHMGFCFFNNIAVAA
RVVQQLTPIKKILILDWDVHHGNGTQRAFNDDPSVLYISLHRYEQGNFYPTGPFGSMQSC
GEEAGLGYSVNVPWPCAGVGDADYIYAFQKVILPIGLEFAPDLVMISAGFDAAAGDELGE
CLVTPAGYAHMTHMLAGLANGRMVVALEGGYNLDSNSVSALAVTKVLLGEAPDQLPPLVA
SDEGTETVWLVAKEQSKYWKSVDPRACEPREDLGDITFSIPEILKAHRQHYLYTEHSMMQ
IPLLRSEMEQLVTCGWSLNPRQRATLNWKDLIWHIDFSKNLIEWVKADGYSLVDANLFPK
PASPASSRTKLAEDIGRDTLIYIWDNYIQLSGANKVIFIGHGPGCQSLVSLMDRRSAGIM
KLVKAVIQVLGPQKMPTVPGANEDIRSWYRKRSFVIVPTTHPFLSPHMRAKDLRRHGTII
PIDERRQIKLISTGLPAIQEIVAQSIADKIPVNNATVINPPTAKAVE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggacgagggactacactgggactactcgactgcttatttagtggttcaaaagttcgac
gcattatttgatacggaagtcgactccaaacacgaattagtcgctggtctgggcacagaa
tactcttcacctttcgaacctcaagaagtggaatactctgatgccatggaggttgacaac
agtgccaaggacgttacccaaaacgcggtcatacgcccacgcgccttgtccgtgcccttc
aaacccccggttgccaattataccgtcggttatgtttattcatcggaaatgacgacacat
cttaaacttggcgatgatcctcatcctgaacaaccgcaacgaattgtgcggatatggaag
atgctgtccgactatcactatatcaaacgaatgctctggctaccaatcagaccagtgacc
agagaagaggctctcttagtccacactgaggatcattgggacaaggttcaagctattcaa
tatatgacggatcagcagattgtcgattctgaggcttattatgagcagctatcactctat
gtcatggctggaaccactagagctgctttgttgagctgtggtggtgtcatagaagctgcc
ttggccgttgctcaagggaggctcaagaaaacccttgcaatagtcagacctccaggtcac
cacgcagaacctgatgaacacatgggcttctgttttttcaataatatcgcggttgctgct
cgagttgtacaacaattgacaccaatcaagaaaatcttaatcctggattgggatgttcac
catgggaacggtacgcagcgtgccttcaatgatgacccatcggttttgtatatatccctg
catcgttacgagcaggggaatttctatccgactggaccatttggtagtatgcaatcatgc
ggcgaagaagccgggctgggctactcggtgaatgttccttggccttgcgcaggagtagga
gacgcagattatatttatgcctttcagaaagtcatcctgcccattggtcttgaatttgcg
ccagatttggtcatgatatcagctggatttgacgcggctgctggcgatgagctaggcgaa
tgtttagtaactcccgctggatacgcccatatgacccacatgttagctggtctggccaat
ggtcgcatggtggttgctttggagggagggtacaacttggattcgaactcagtatcagct
ctggccgtgactaaggtcctattgggcgaggcccctgaccagttgccccctctcgttgcc
agtgatgagggtacagaaacagtttggcttgtagcgaaggagcagagcaagtactggaag
agtgtagatccacgtgcttgtgaaccccgagaagatctgggagatatcactttttcgata
cccgaaatactcaaagcgcatcgacaacattacctatataccgaacattcaatgatgcag
attcctttactacgatcagagatggagcaactggtaacttgcggatggagcttgaatcct
cggcaacgtgcgacgttgaattggaaagatcttatctggcacattgatttttctaagaac
cttattgaatgggtgaaagcggatggttattccttagtcgacgcaaacctattcccaaag
cccgcgtcgcccgcgtcatctcgaacaaaactagcggaagacattggtcgcgataccctt
atatacatttgggacaactatatacagctttccggagccaataaagttatctttattggc
catggtccaggatgccagtctttagtcagtttaatggatcgacgttccgcagggatcatg
aaacttgttaaagcggtcattcaggtgctaggaccccaaaaaatgcccacggtgcccggg
gcaaatgaagacatacggagttggtaccggaagcgttcatttgtcatcgtccctacaacc
catcctttcctcagccctcacatgagagcaaaagatttacgaaggcacggaaccatcata
cccattgacgaacgtcgacaaatcaaactcattagcactggccttcccgctattcaggag
attgtagctcaatcaatcgcagataaaattcccgtgaacaacgccacagtaattaaccca
ccaactgcgaaagcagttgaatga
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integrated database retrieval system
