Antrostomus carolinensis (chuck-will's-widow): 104527125
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Entry
104527125 CDS
T08541
Name
(RefSeq) LOW QUALITY PROTEIN: BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104527125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acar03019
]
104527125
04121 Ubiquitin system [BR:
acar04121
]
104527125
03036 Chromosome and associated proteins [BR:
acar03036
]
104527125
03400 DNA repair and recombination proteins [BR:
acar03400
]
104527125
Messenger RNA biogenesis [BR:
acar03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
104527125
Ubiquitin system [BR:
acar04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
104527125
Chromosome and associated proteins [BR:
acar03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
104527125
DNA repair and recombination proteins [BR:
acar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
104527125
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_4
Ank_5
Ank_3
zf-RING_6
BRCT
BRCT_2
NIBRIN_BRCT_II
PTCB-BRCT
RTT107_BRCT_5
SVN
Motif
Other DBs
NCBI-GeneID:
104527125
NCBI-ProteinID:
XP_010169050
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
SCVGDCVGRECPVCHMPAWVQDAQINRQLDNMIQLCSKLRHLLGADTSDTTEDMSTPKDS
DFGTKNKKEQIKMWFSPRSRKIRCVLNKSQPETKTTQSSGLCQDTSSVYDFFPSPPDEKP
SKPTKKPTQRQNKMMKKKRLADINKVWSLEKLEQKGGVEKSPKEKCVTISSQPVVLCTPE
PNSPEEXXXXXXXXXKNMENVEILPQEKSSEKKGNNKIECPVQVSREKNSATETSVSIEN
EPTRLKREREQSSLPVTSQSKRPRRSERNIIGKSVDQADDLEELPQGCPISPTTGHKTPV
QTSSSVSKLTDTVMKTRSSAVCQVINSPSLSKSPSTPSSSKTCNQVGIPHSPSVLKSPGG
NTIARRNYKGETLLHVASIKGDLAAVEQLLKSGADPNVKDNAGWTPLHEACNHGHKEVVE
LLLQYKALVNTTGYQNDSPLHDAAKNGHVSIVELLLLHGASRDAVNIFGLRPVDYAESEK
MKSVLMLPVKNESFSLNQPSEALSSSQPRDGPLGILGSNLSSEQQKLLNKLATVLKARRC
TEFNSRVTHLVIPDVPMPNTVKCMMAVLTGCWVLKFEWVRACLRTAAREQEEKYEIQGGP
QRGRLNREQLLPKLFDGCYFYFLGSFSRHQKSDLVELVKAAGGQILVRQPKPDSDVTQTI
NTVAYHAESTSDQRFCTQYVIYDASSKFKPEKIRQGKVWMAPSSWLIDCVMSFQLLPVK
NT seq
2161 nt
NT seq
+upstream
nt +downstream
nt
atcttgtgtgggtgactgtgttggcagagaatgcccagtgtgccacatgccagcctgggt
gcaagatgcacagataaaccgccagctagataacatgattcagctttgcagcaaactgcg
gcatctcctgggtgcagacacctcagatacaacagaagatatgtccacaccaaaagactc
agactttggaacaaaaaataaaaaggaacagataaaaatgtggttcagcccaagaagcag
gaagattcgatgtgtcctgaacaagagtcagcctgagactaaaacgactcaaagcagtgg
cctttgtcaagacacatcttcagtttatgatttctttccttctcctcctgatgaaaagcc
cagcaagccaacaaaaaagccaacacagaggcagaacaagatgatgaagaagaaacgtct
agcagacattaacaaagtgtggagcttagagaagctggagcagaaaggaggagttgagaa
gtctcccaaggagaagtgtgtgaccatcagcagtcagccagtagtcctatgcactccaga
gccaaatagccctgaagagnnnnnnnnnnnnnnnnnnnnnnnnnncaaaaatatggaaaa
cgtggaaatattgccacaggaaaaatcctcagagaagaaaggcaacaataagattgagtg
ccctgtccaagtcagcagggaaaaaaatagtgctacagagacatcagtgtcaatagaaaa
tgaacccacgcgtttaaaacgtgaaagggagcaatccagccttccagttacttctcagtc
taaaagaccaagaagaagtgagaggaacattattgggaagtcagttgatcaagcagatga
cttagaggagctacctcagggttgccccatctcccccacgactggacacaagacaccagt
tcagacttcctcctctgtatcaaaactcactgacactgtaatgaagacaagaagctctgc
agtctgtcaagtaataaatagtccttcactttcaaaatctccttctaccccatcttcttc
taagacttgtaatcaagtaggaataccacatagtccttctgtcttgaagtctcctggtgg
taacacaattgccagaagaaattacaaaggagaaactttgctccacgttgcttccatcaa
gggtgatttagcagctgttgaacagctgctgaaaagtggggcagatcctaatgtcaaaga
taatgctggctggacaccgctgcacgaggcatgtaatcacgggcacaaagaagtggtgga
gctgttgctgcagtacaaggcgttagtgaatactacggggtatcagaacgactctcccct
tcatgatgctgccaagaacgggcacgtgagcattgttgagctgctgcttttgcacggtgc
ctcccgagatgcagttaatatatttggtctgcggcctgtggactatgcagaaagtgaaaa
gatgaagtctgtgctaatgttaccagtgaagaatgaatcattttcacttaaccaaccctc
tgaggcactgagctccagccagccaagagatggacctcttggtatactggggagcaatct
tagttcggagcaacagaaactgctgaacaaactagcaacagttctgaaggctcgaaggtg
tactgaatttaacagcagagtaactcatcttgttatccctgatgttccaatgccaaatac
tgtcaaatgtatgatggctgttctgactggatgttgggtcctcaagtttgaatgggtacg
agcctgtctacgaaccgcagctcgagaacaagaagagaaatatgaaatccaaggtggccc
acaaagaggccggctcaacagagaacagctgctgcctaagttgtttgatggatgctactt
ctattttttgggatctttcagccgtcaccagaagagtgatctggtggagttggtcaaagc
agcaggaggacaaattctggttaggcagccaaaaccagacagcgacgtgacgcagacaat
caacacggtggcttaccatgcagaatctacttctgaccagagattttgcactcagtatgt
aatctatgatgcgtcttctaaattcaagccagagaaaattcgtcagggcaaagtctggat
ggccccctctagctggcttatagactgtgtgatgtcatttcagcttctgcctgtaaaata
a
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