Aciduliprofundum sp. MAR08-339: AciM339_0076
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Entry
AciM339_0076 CDS
T02396
Name
(GenBank) putative DNA-binding protein containing a Zn-ribbon domain
KO
K06932
tRNA(Ile2)-agmatinylcytidine synthase [EC:
6.3.4.22
]
Organism
acf
Aciduliprofundum sp. MAR08-339
Brite
KEGG Orthology (KO) [BR:
acf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acf03016
]
AciM339_0076
Enzymes [BR:
acf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.22 tRNAIle2-agmatinylcytidine synthase
AciM339_0076
Transfer RNA biogenesis [BR:
acf03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
AciM339_0076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1743
tRNA_anti-codon
tRNA_anti_2
C1_2
OrfB_Zn_ribbon
DZR
Zn_Tnp_IS1595
DZR_2
RNA_POL_M_15KD
Zn_ribbon_SprT
DNA_RNApol_7kD
zf-TFIIB
C1_1
zf-ribbon_3
Motif
Other DBs
NCBI-ProteinID:
AGB03977
UniProt:
L0HGU8
LinkDB
All DBs
Position
73185..74525
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AA seq
446 aa
AA seq
DB search
MRGKCKDVYIGMDDTDSRSGMCTTYLVKVLVEEFQKEGFDLIGPPRLVRLNPNIPWKTRG
NGAVVLRVGRGYGEKRIVGEIRGRKIHAYRNGKNISLELKDIVEKVKNYFVLENDSTNPG
IVISERKLPEKLYWITVRGVVSLDYVEGILKEHGAKYAKFKNGRGIIGASAGIAWRARHF
TYELLTYLPEDRWNKERFIDARSVIEMDSEIKSTFDNYDYENGYVAIVPHSKTPVLYGIR
GTDPDDLIRAKDMIISEQYDSWFLFLTNQGSDDHIVSKKIGEIGMNENVKIRGKVTAKPR
KIEGGHVILTLRDNTGEIDCAAYEPTKNFRRIVEGLIEGDEIEVYGSVRSEPRSVNIEKI
HVLKLAEKRVKVSNPVCPKCGRKMESIGRGKGYRCRKCGFKLPESAAIYRIVEREIKEEW
YEVPVIARRHLAKPLKIMGKRSSKIF
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcgagggaaatgtaaggacgtgtacataggcatggacgacacggattcacgcagcggg
atgtgcaccacataccttgtaaaggttcttgttgaagagtttcaaaaggaggggtttgat
cttatcggtcccccgagactggttagattgaatcctaacataccctggaaaacgaggggc
aacggtgccgtggttctaagagttggaaggggatacggggagaaaagaatagtgggagaa
atcaggggaagaaaaatccatgcctacaggaacggcaagaacatatccctagaactgaaa
gatattgtggaaaaggtgaaaaattattttgttcttgagaatgattccacaaacccgggc
attgtgatatcagagagaaaactaccagaaaaattgtactggataacggtcagaggtgtg
gtctctctggattatgttgaagggatattgaaagagcacggggcaaaatacgcaaaattc
aaaaatggacgtggcataattggagcatctgcaggtattgcatggagggcaaggcatttc
acctacgaacttctcacctaccttccagaggataggtggaacaaggaaaggttcatagat
gccaggagcgtaattgagatggacagtgaaataaagagcaccttcgataactacgactat
gaaaacggatacgtcgccattgtaccccattcaaaaacccccgtactttacggtatcagg
ggcacggacccggacgatttaataagggccaaggatatgatcataagtgagcagtacgac
tcctggttcctgtttcttacaaaccagggcagtgacgaccacatagtttccaaaaaaata
ggggaaatagggatgaacgagaacgttaaaatcaggggcaaagttacagcaaagcccaga
aaaattgagggagggcacgtgatcctcacactgagggataatacgggcgagattgactgt
gcagcctacgaaccaaccaaaaatttcaggaggatagtggaaggactcattgaaggagac
gagatagaagtttacggaagcgtacgcagtgagccaagaagcgtaaacattgaaaaaata
cacgtgctcaaactggcagaaaaaagggtaaaggtctcaaatcccgtatgtccaaaatgt
ggaagaaaaatggaaagcattggaaggggaaagggctacagatgccgcaaatgcggattc
aaactacctgaaagtgcagccatctaccggatagttgagagggaaataaaagaggagtgg
tacgaggtgcctgtaatagccaggagacaccttgcaaaacccctgaaaataatgggaaaa
aggtcatctaagatattttaa
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