Acanthisitta chloris (rifleman): 103804614
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Entry
103804614 CDS
T08456
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
achl
Acanthisitta chloris (rifleman)
Pathway
achl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103804614 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
achl03019
]
103804614 (BARD1)
04121 Ubiquitin system [BR:
achl04121
]
103804614 (BARD1)
03036 Chromosome and associated proteins [BR:
achl03036
]
103804614 (BARD1)
03400 DNA repair and recombination proteins [BR:
achl03400
]
103804614 (BARD1)
Messenger RNA biogenesis [BR:
achl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
103804614 (BARD1)
Ubiquitin system [BR:
achl04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
103804614 (BARD1)
Chromosome and associated proteins [BR:
achl03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
103804614 (BARD1)
DNA repair and recombination proteins [BR:
achl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
103804614 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_4
Ank_3
Ank_5
zf-RING_6
BRCT
BRCT_2
NIBRIN_BRCT_II
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
103804614
NCBI-ProteinID:
XP_009075475
LinkDB
All DBs
Position
Unknown
AA seq
720 aa
AA seq
DB search
SCVGDCVGTGCPVCHMPAWVQDAQINLQLDNMIQLCSKLRQLLGADTPDSAEDASTPTDS
VLEKQSKKEQIKMWFSPRSRKVRFVLAQSQPETKSNDFSQGTTSVYDFFPSPPHEKPSKP
AKKPTQKQMKKMKKKQLADINKEWSIEKPEQKGLEKKTPKEKCVTICSQPVVLCTPEPDS
PEEGPQQESVEEADSSKNTENVELPPQIKSPGKKDNSEVVCPAQDSRETSCATETSLSIE
NKSTPLKRGREQSGLQVSSQSKRPKKTERSITGNSGRQADCLEELPQGSPISPATEHQTP
VQISSCASKRTHPGVKTRSSAVLQATNSPSLSKSPSTPSTSKTCSQVAIPLSPLVLKSPG
GNTIARRNYKGETLLHVASIKGDLAAVEQLLKNGADPNVKDHAGWTPLHEACNHGHKAVV
ELLLQYRALVNTTGYQNDSPLHDAARNGHVAIVELLLQHGASRDAVNIFGLRPVDYAESE
KMKSVLMLPVRNESFSLSQPSEALSPSQPRNGPLGILGSSLSEEQQQLLKKLTTVLKARR
CTEFTSAVTHLVIPDAPMPSTVKCLMAVLSGCWVLKFEWVQACLQTSVREQEEKFEIQGG
PQRGRLNREQLLPKLFDGCYFYFLGSFKHHQKSDLRELVKAAGGQILVRQPKPDSDVTQT
INTVAYHAESTSDQRFCTQYVIYDAASKFKPEKIRQGKVWMAPSSWLIDCVMSFQLLPVK
NT seq
2164 nt
NT seq
+upstream
nt +downstream
nt
atcctgtgtgggtgactgtgttggcacaggatgccccgtgtgccacatgccagcctgggt
gcaagatgcacagatcaacctgcagctggataacatgattcagctttgcagcaagctgcg
gcagctactgggtgcagacaccccagattcagcagaagatgcatccacaccaactgattc
agtcttggaaaaacagagtaagaaggaacagataaaaatgtggttcagcccaagaagtag
gaaggtccgattcgtcctggcccagagtcagcctgagactaaaagcaacgatttcagtca
aggcacaacttcagtttatgattttttcccttctcctcctcatgagaagccctccaagcc
agcaaaaaaaccaacacagaaacagatgaagaagatgaagaagaaacagctagcagacat
taacaaagagtggagcatagagaagcctgagcagaaagggttagagaagaagactcccaa
ggaaaagtgtgtgaccatctgcagtcaaccagtagtcctgtgcactccagaaccagatag
ccctgaggagggacctcagcaggagtctgtagaggaagctgactccagcaaaaatacaga
aaatgtagaattgccaccacagataaaatctccagggaagaaagataacagtgaggtcgt
gtgccctgcacaagacagcagggaaacaagttgtgccacagagacgtcattgtccataga
gaataaaagtacacctttaaaacgtggaagggagcaatctggacttcaggttagttctca
gtctaaaagaccaaagaaaactgagaggagcattactgggaattcaggcaggcaggcaga
ttgcttagaggagttacctcagggttcccccatctctccagcgactgaacatcagacacc
agttcagatttcttcctgtgcatccaaacgcactcaccctggagtgaagacaagaagttc
tgcagtccttcaagcaacaaacagtccttcactatcaaaatctccttctacgccatctac
ttctaagacttgcagtcaagtagcaataccactcagtcctttggtgttaaaatcccctgg
tgggaacacaattgccagaagaaattacaaaggagagaccttgctccatgttgcttccat
caagggtgacttagcagctgtggaacagcttctgaaaaatggggcagatcccaatgtcaa
agaccatgctggctggacaccactgcacgaggcgtgtaaccatgggcacaaagccgtggt
ggagctgctgctgcagtacagggccctggtgaacaccacggggtaccagaacgattcgcc
gcttcatgacgctgccaggaacgggcacgtggccattgtggagctgctgctgcagcatgg
tgcctcccgggatgcagttaatatatttggtctgcggcctgtggactatgcagaaagtga
aaagatgaagtctgtgctgatgttaccagtgaggaatgaatcattttcacttagccagcc
ctctgaggccctgagccccagccagccaagaaatggacctcttggtatactggggagcag
tcttagtgaagagcaacagcaattgctgaagaaattaaccacagtgctgaaggctcgaag
gtgcactgaattcaccagtgcagtaactcatcttgttatccctgatgctcccatgccgag
tactgtcaaatgtctgatggctgttctgtctggatgttgggtcctcaagtttgaatgggt
ccaagcctgtctacaaacctcagttcgagaacaggaagagaagtttgaaattcaaggtgg
cccccaaagagggaggctcaacagagaacaactgctgcctaagttgtttgatggatgcta
cttctattttttgggatctttcaaacatcaccagaagagtgatcttagggagctggtcaa
agcagcaggaggacaaattctggttagacagcccaagccagacagtgatgtgacacagac
gatcaacactgtggcataccatgcagaatctacttctgaccagaggttttgcactcaata
tgtaatctatgatgcggcgtctaaattcaagccggagaaaattcgtcagggcaaagtctg
gatggccccctccagctggctcatagactgtgtgatgtcgtttcagctcctgcctgtaaa
atga
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