Anopheles coluzzii: 120949221
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Entry
120949221 CDS
T07312
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
acoz
Anopheles coluzzii
Brite
KEGG Orthology (KO) [BR:
acoz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
acoz01009
]
120949221
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoz03019
]
120949221
04131 Membrane trafficking [BR:
acoz04131
]
120949221
03036 Chromosome and associated proteins [BR:
acoz03036
]
120949221
Enzymes [BR:
acoz01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
120949221
Protein phosphatases and associated proteins [BR:
acoz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120949221
Messenger RNA biogenesis [BR:
acoz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
120949221
Membrane trafficking [BR:
acoz04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
120949221
Chromosome and associated proteins [BR:
acoz03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
120949221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
120949221
NCBI-ProteinID:
XP_040222304
LinkDB
All DBs
Position
X:9492195..9503068
Genome browser
AA seq
1114 aa
AA seq
DB search
MNPNVVTRSSAKQSKVRTRAQQAATEAEQEERRVKLYGGYRSTGKGSIAEAKKQGKLRMS
ATSQNGTGAGGDQRRSSDFTEVQLKDIFQNAQSGARTVRGPTGILYDERFALHRCLWDTN
YPECPERYLRVMERFTIGQLVDRCQFVAPRPATRAELLTKHTAEQIELLAQTHGSQDEPE
LERLSSHYDAIFIHPTSYETSVLAVGSTIQLVESVWSGTVQNGMAILRPPGHHAMTAEYN
GYCFFNNVAIAAQHALDHLGTQKILIVDWDVHHGQGTQRMFYSDPRVLYFSIHRYEHGTF
WPNLRESDFDYVGTGKGEGYNFNVPLNKTGMTNGDYLAIWQQLLLPVATEFQPELIIVSA
GYDAAYGCPEGCMEITPAFYSHLLSPLLLMAQGRVAVVLEGGYCLESLAEGCALTLKTLL
GDPAPRLAEALQPPSESMQASILNCIYSHRKYWKCLQLYELYDLEDYNNTNPQDNFHKVI
KCYVPPEPPAQPGRYETRNCYPVQSADERARIQDRLARLHLATDLSFPPDRVCYVYDELM
LEHRNSAEKWHPEQPERIAKIMQRLTGDYQLAQRMKRLPGRLATTEELCLVHGPEHVRLI
GEVCQSSTMKQTADQYNSIYFHPSTDASARMATGSVLTVVEDVLEGRTRSGVCVVRPPGH
HAEADTPHGFCIYNSIAVAARHAVKRYGLRRVLIVDWDVHHGNGTQHIFEQDPHVLYVSV
HRYDNGAFFPRSTDADYTVVGSGPGRGFNVNIPWNRKGMGDPEYVAAFHSVILPIAYEYE
PELVLVSAGFDAAIGDPLGGCRVTPEAYGHFTQWLSVLAGGRLVLCLEGGYNVNSISHAM
AMCAKALLGDPLPMLLPVSGTARTPPATHASCCETLSNVLSVQRLYWRSLCFNKKLPSSE
PLLEEAGSELIEALDNMTLSERGGTDQQQPQQTTSTPSSSSSAATAGSSGGEQAAGSSKQ
PSQTLTEFLEANLEALQNEEMFAVIPRRDCPHLKLLRPETAPEAIDTRTPCSDCGAEVEN
WICLLCFGVYCGRYVNEHMLRHGTGAADHPLALSFADLSVWCYGCDAYIDHPALHHYKNL
VHQDKFHEPLVWSYGSDLVLDVVPGSAGRKAGQD
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgaacgtggtgacgcgcagcagcgccaagcagtcgaaggttcggacccgcgcc
cagcaggcagcaacggaggcggagcaggaggagcggcgggtgaagctgtacggtggctat
cggtcgaccggcaagggcagcatagcggaggccaagaagcagggcaagctgagaatgtcc
gccaccagtcagaacggcacgggggccggcggcgaccagcgccgcagctccgactttacc
gaggtgcagctgaaggacatcttccagaacgcgcagagcggggcgcggacggtgcgcggc
cccaccggcatcctgtacgacgagcggttcgcgctgcaccgctgcctgtgggacaccaac
tatccggagtgcccggagcggtacctgcgcgtgatggagcgcttcacgatcgggcagctg
gtcgaccggtgccagttcgtagcgccccggccggccacccgggccgagctgctgaccaag
cacacggccgagcagatcgagctgctggcgcaaacgcacggctcgcaggacgagcccgag
ctggagcggctgagctcgcactacgacgccatcttcatccatccgacgtcgtacgaaacg
agcgtgctggcggtcggcagcacgatccagctggtcgagagcgtgtggagcgggacggtg
cagaacgggatggcgatactgcggccgcccggccaccacgcgatgaccgccgagtacaat
gggtactgcttcttcaacaacgtggcgatcgcggcccagcacgcgctcgaccatctcggc
acgcagaagatactgatcgtcgactgggacgtgcaccacgggcagggcacgcagcggatg
ttctactccgatccgagggtgctgtacttctccatccatcggtacgagcacggcacgttc
tggccgaacctgcgcgagtccgactttgactacgtcggcaccggcaagggcgaggggtac
aacttcaacgtgccgctcaacaagacgggcatgaccaacggcgactacctcgcgatctgg
cagcagctgctactgccggtcgccacggagttccaaccggagctgataatcgtatcggcc
ggctacgacgctgcgtacggatgtccagagggctgtatggaaataacgcccgcgttctac
tcgcacctgctcagcccgctgctgctgatggcgcaggggcgcgtcgccgtcgtcctggag
ggtggctactgtctcgagtcgcttgccgagggctgcgcgctcacgctcaagacgctgctc
ggcgatccggccccacggctggcggaagcgctgcagcccccgtccgagagcatgcaggcg
tccatcctgaactgcatctacagccaccggaagtactggaagtgtttgcagctgtacgag
ctatacgacctggaggactacaacaacaccaacccgcaggacaacttccacaaggtgatc
aaatgctacgtgccgccggaaccgccggcccagcccggccggtacgagacgcgcaactgc
tacccggtgcagtcggcggacgagcgcgcccgcatccaggaccggctggcccggctgcac
ctcgccaccgatctgagcttcccgcccgaccgcgtctgctacgtgtacgacgagctgatg
ctcgagcaccgcaacagtgcggaaaagtggcacccggagcagccggagcgcatcgcgaag
atcatgcagcggctgaccggggactaccagctggcgcagcgcatgaagcggctgccgggc
cggctcgccaccaccgaggagctgtgtctggtgcacgggccggagcacgtgcgcctgatc
ggcgaggtgtgccagtcgagcacgatgaagcagacggccgaccagtacaactcgatctac
ttccacccgagcacggacgcgagcgcccgcatggcgaccggctcggtgctgaccgtggtg
gaggacgtgctggagggccgcacccggtcgggcgtgtgcgtggtgcgcccgcccggccac
cacgcggaggcggacacgccgcacggcttctgcatctacaacagcatcgcggtggcggcc
cgtcatgcggtcaagcggtacgggctgcggcgcgtcctgatcgtcgactgggacgtgcac
cacggcaacggcacgcagcacatcttcgagcaggacccgcacgtgctgtacgtctcggtg
caccggtacgacaatggggcgttcttcccgcgcagcaccgacgcggactacaccgtcgtc
ggcagcgggccgggccggggcttcaacgtgaacatcccctggaaccggaagggcatgggc
gacccggagtacgtggccgcgttccactcggtcatactgccgatcgcgtacgagtacgag
ccggagctggtgctggtgtcggccgggttcgatgcggcgatcggcgacccgctcggcggg
tgccgcgtgacgcccgaagcgtacggccacttcacgcagtggctgtcggtgctggcgggc
ggccggctcgtcctgtgcctcgagggcggctacaacgtcaactcgatctcgcacgcgatg
gccatgtgcgcgaaggcgctgctgggcgatccgctgccgatgctgctgccggttagcggc
accgcccgcacgcccccggcgacgcacgcgtcctgctgcgagacgctctcgaacgtgctg
tccgtgcagcggctctactggcggtcgctctgcttcaacaagaagctgccgagcagcgaa
ccgctgctggaggaggccggcagcgagctgatcgaggcgctcgacaatatgacgctgagc
gagcggggcggcaccgaccagcagcagccgcagcaaaccacgtccaccccgtcgtcgtcg
tcgtccgctgcgacggctggcagcagtgggggtgagcaggcggcgggcagctccaaacaa
ccgtcccaaacgctgaccgaatttttggaggctaacttagaggcactgcagaacgaggaa
atgtttgccgtaataccgcgccgcgactgtccccatctgaagctgctgcgaccggaaacg
gcccccgaggcaattgacacgcgcacaccgtgcagtgactgtggcgcggaggtggaaaac
tggatctgtctgctctgcttcggcgtgtactgcggccggtacgtgaacgagcacatgctg
cggcacggtaccggggcggccgaccatccgctcgccctcagcttcgccgacctgtccgtc
tggtgctacgggtgcgacgcgtacatcgaccatcccgccctgcaccactacaagaacctg
gtgcaccaggacaagttccacgagccgctcgtctggtcgtacggcagcgacctcgtgctg
gacgtcgtgccgggcagcgccggccgcaaggcgggacaggactga
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integrated database retrieval system
