Actinidia eriantha (wild kiwifruit): 130787323
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Entry
130787323 CDS
T09464
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog
KO
K10683
BRCA1-associated RING domain protein 1
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130787323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130787323
04121 Ubiquitin system [BR:
aew04121
]
130787323
03036 Chromosome and associated proteins [BR:
aew03036
]
130787323
03400 DNA repair and recombination proteins [BR:
aew03400
]
130787323
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
130787323
Ubiquitin system [BR:
aew04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
130787323
Chromosome and associated proteins [BR:
aew03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
130787323
DNA repair and recombination proteins [BR:
aew03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
130787323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-HC5HC2H
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_6
zf-HC5HC2H_2
zf-RING_10
zf-C3HC4_4
zf-RING_5
RTT107_BRCT_5
zf-rbx1
PTCB-BRCT
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
130787323
NCBI-ProteinID:
XP_057503698
LinkDB
All DBs
Position
11:complement(11676025..11684044)
Genome browser
AA seq
978 aa
AA seq
DB search
MADSSHLERMGRELKCPICLSLLNSAVSLTCNHVFCNLCIEKSMKFVSSCPVCKVPYRRR
EIRPAPHMDTLVSIYKNMEVASGFKIFVTQTGPSAKLSDEDNLAGGSRICGRQKSDRTCQ
EILENQRRCKGKRSKLSLNIDHENSSLDPVKPSFPTKKRVQVPQYPPPSDTPVQLRTFES
GCVEIAKVQPEKNSVGLKEKHAVNEKGEPVFTPFFWLRDDEDVEKLTQQTDGGDNMDTPP
NAPCFSDIKDSADEIPTKVVPEGGTNTSCNDVNYFDSEMFEWTQRPCSPELCSKPMKTQV
PDIDEFDGIQVKDCKLSTQAVTTNGKHGMEKMENVVSKQRTDNVEVSSAALSSPKIVDTN
TDDRMRNSNKRGRKVSERTKKKQAKRIMNEALRVQVDLEKVTERTIHEKVHNNKVTSLDL
SKKTHKRGKKVMFHYTAVERGPEKVSALSTGANSLNLDNKTMITDLPGSSSDQKESIIKT
IARVQRDHPKRSRIKTTINSKCVRELRCSKKLKISPFDVSKDNLVNGVQDGCDGVSAKNT
RPFGKLQFNSEVRDLEDSTELDKVLPALDGAVLRKCETVPKKIQCAFCHSTEDCEASGDM
VHYLNGKPVSADYNGGSKVIHAHRNCTEWAPNIYFEDENAINLEAELARSRRIKCCCCDV
RGAALGCYENSCRKSFHVPCAKLIAECRWDNDNFVMLCPLHASSKLPNEMSGSQMKRKNN
GIPKRPLTVQQPEVAVKHASSACQRWISSGSCGKLFLCCSALKNEDKEIVSEFERFSGAK
VLKNWDSSVTHVIASTDENGACRRTLKILMGILEGKWILSIEWIKACMMAMKPVDEQLYE
IGLDVHGIRDGPRIGRSRVLNKQQKLFDGCKFYFTGEFVPSYKRYLHDLIIVAGGTVLQR
KPIPSNQECMPFGNPTSSTFIIYSLESPDKCDPNTRNLIFSQRRLDAEALASSTEAIAAS
NSWVLNSIAACKLQYLPK
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggcagattcttctcaccttgaaagaatgggcagagaactcaagtgccccatctgcttg
agtctgctgaactctgcggtttcgctcacatgcaaccatgtattttgcaatttatgtatt
gaaaaatctatgaaattcgtgtccagttgtcctgtttgcaaggttccgtataggcgaaga
gagattcgtcctgctcctcatatggataccttggtgagcatttacaagaacatggaagtt
gcttcagggttcaaaatatttgtcactcaaactggaccttcagccaaattatcagatgaa
gacaacctagctgggggaagtaggatttgtggaaggcaaaagagtgataggacatgccaa
gagatactggaaaatcagagaaggtgcaaaggaaagcggtcaaaactatcattaaacatt
gaccatgaaaattcaagtcttgatcctgtgaaaccatcctttccaacaaagaaaagggtt
caggttccacaataccctcctccttcagacactccagtgcagcttagaacatttgaaagt
ggatgtgttgaaattgcaaaagttcaaccggagaagaattcagttggattaaaggaaaag
catgctgtaaatgaaaaaggagagccagtattcactccatttttctggttgagagatgac
gaggatgtagaaaagttaactcagcagacagatggaggtgacaacatggatacaccacct
aatgctccttgcttcagtgacataaaggactcagctgatgaaattcccactaaagtggtc
ccagaaggagggacaaatacatcatgtaatgatgtcaattactttgatagcgagatgttt
gaatggacacaaagaccttgttctcctgaactctgttcaaaacccatgaaaacacaggtt
ccagatattgatgagtttgatgggattcaggtaaaggattgcaaattatccactcaagct
gtgactacaaatggaaaacatggaatggaaaagatggaaaatgtggtttccaaacagagg
accgataatgtggaagtaagctcagctgctttgtcctctccaaaaattgtggatactaac
actgatgatagaatgagaaattccaataagagaggcaggaaggtgagtgaaagaaccaaa
aagaaacaagccaagagaatcatgaatgaagctctccgagttcaagttgatttagagaaa
gtgactgaaaggactattcatgagaaggtacataacaataaggttacttcgttagatttg
agcaaaaaaactcataagaggggtaagaaggttatgtttcattatactgctgtagaacgt
ggaccagaaaaggtttcagccttatccactggagcaaattctctgaatctggacaacaag
accatgatcactgacttgccaggttcgtcatcagatcagaaagaaagcattatcaagaca
attgctcgggtacagagagatcaccctaaaagatcaagaattaagaccacaatcaattca
aaatgtgttcgagagctgagatgttcaaaaaaactaaaaatctccccctttgatgtctca
aaggataatttggttaatggagttcaagacggttgtgatggagtttctgccaagaacact
cgaccctttggaaagcttcaatttaattctgaagtcagagatcttgaggattccacagaa
ttggacaaggttcttcctgccttggatggagcggtattgcgtaaatgtgagacagttcct
aagaaaatccagtgtgcgttctgtcattctacagaagattgtgaggcctcaggagacatg
gttcattaccttaatggcaagcctgtttcagcagattataatgggggatcaaaggtcata
catgcacataggaattgcacagaatgggcccctaatatatattttgaggatgaaaatgcg
atcaaccttgaagctgaattagcaagaagtcgaaggattaaatgctgttgctgtgacgtc
agaggggcagcactgggatgttatgagaacagttgtcgcaaaagcttccatgttccttgt
gcaaagttgattgcagaatgccgctgggataatgataactttgtcatgttgtgccctctc
catgcatcctcaaaacttcctaatgagatgtctggttctcaaatgaaaaggaaaaataat
ggcattccaaaaagaccattgacagtccaacaaccagaagttgctgttaaacatgctagt
agtgcatgtcagcgttggatttccagtgggtcatgcggaaaactgtttctctgttgttca
gctctcaaaaatgaagataaggaaattgtttctgagtttgagagattttctggagctaag
gtactgaaaaactgggattccagtgtcacccatgtcattgcatctacagatgagaatgga
gcttgcagaagaaccctcaagattctaatgggaatcttagaggggaagtggatactgagt
attgagtggattaaggcttgcatgatggccatgaaacctgttgatgagcagctttatgag
attggccttgacgttcatggaatcagggatggtcctcgaattggaagatcgagagtttta
aacaagcaacaaaagctcttcgatgggtgtaagttttactttactggagaatttgtacct
tcatacaagaggtatctacatgatcttataattgtggccggtgggaccgttctgcaaagg
aagcctattccaagtaaccaggaatgcatgccattcggaaaccccacatcatcaaccttc
atcatttatagcctcgagtcaccagacaaatgtgatcccaacacgagaaatttgattttc
agccagaggcggttagatgcagaagctttagcaagttccacagaagccatagcagcaagc
aactcatgggttttgaactccattgctgcttgtaagttgcagtaccttccaaagtag
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