Ailuropoda melanoleuca (giant panda): 100475375
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Entry
100475375 CDS
T01329
Symbol
ABCB4
Name
(RefSeq) LOW QUALITY PROTEIN: phosphatidylcholine translocator ABCB4
KO
K05659
ATP-binding cassette, subfamily B (MDR/TAP), member 4 [EC:
7.6.2.2
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml02010
ABC transporters
aml04976
Bile secretion
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100475375 (ABCB4)
09150 Organismal Systems
09154 Digestive system
04976 Bile secretion
100475375 (ABCB4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aml02000
]
100475375 (ABCB4)
Enzymes [BR:
aml01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
100475375 (ABCB4)
Transporters [BR:
aml02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
100475375 (ABCB4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
Rad17
RsgA_GTPase
AAA_16
AAA_5
Zeta_toxin
AAA
AAA_29
G-alpha
AAA_28
AAA_14
AAA_7
SbcC_Walker_B
DUF87
AAA_15
PRK
nSTAND1
DUF815
NTPase_1
Peptidase_MA_2
Motif
Other DBs
NCBI-GeneID:
100475375
NCBI-ProteinID:
XP_034523165
Ensembl:
ENSAMEG00000001034
LinkDB
All DBs
Position
1:complement(138024914..138095182)
Genome browser
AA seq
1280 aa
AA seq
DB search
MDLEAGRNGTVPCPRRAEGDFELGGSRNQDKKKKKRMNLIGPLTLFRYSDWQDKLLMSLG
TIMAIAHGSGLPLMMIVFGQMTDKFVDTAGNFSFPVNFSLSMLNPGRILEEEMTRYAYYY
SGLGAGVLVAAYIQVSFWTLAAGRQVRKIRQEFFHTILRQEIGWFDVNDTTELNTRLTDD
ISKISEGIGDKVGMFFQAVATFFAGFIVGFVRGWKLTLVIMAISPILGLSTAVWAKILSA
FSDKELAAYAKAGAVAEEALGAIRTVIAFGGQNKELERYEKHLENAKKIGIKKAISANIS
MGIAFLLIYASYALAFWYGSTLVISKEYTIGNAMTVFFSVLVGAFSVGQAAPCIDAFANA
RGAAYAIFNIIDSNPKIDSFSERGHKPDSIKGNVEFNDVHFSYPARANVKILKGLSLKVE
SGQTVALVGNSGCGKSTTVQLLQRLYDPDEGRISIDGQDIRTFNVRYLREIIGVVSQEPV
LFSTTIAENIRYGRGNVTMDEIKKAVKEANAYDFIMKLPQKFDTLVGDRGAQLSGGQKQR
IAIARALVRNPKILLLDEATSALDTESEAEVQAALDKAREGRTTIVIAHRLSTIRNADVI
AGFEDGVIVEQGSHRELMKKEGVYFRLVNMQTSGNQIQSGEFDLELNNEKAAADMAPNGW
KSHIFRNSTRKSLRNSRKYQKGLDVETEELDEDVPSVSFLKVLKLNKTEWPYFVVGTVCA
IANGALQPAFSIIFSEMIAVFGPGDDEIKQQKCNMFSLLFLGLGIISFFTFFLQGFTFGK
AGEILTTRLRSLAFRAMLRQDMSWFDDHKNSTGALSTRLATDASQVQGATGMRLALIAQN
TANLGTGIIISFIYGWQLTLLLLSVVPIIAVSGIVEMKMLAGNAKRDKKELETAGKIATE
AIENIRTVVSLTQERKFESMYVEKLYGAYRNSVRKAHIYGITFSISQAFMYFSYAGCFRF
GAYLIVNGHMRFRDVILVFSAIVFGAVALGHASSFAPDYAKAKLSAAHLFMLLERQPLID
SYGEEGLRPDKFEGNVTFNEVVFNYPTRPKVPVLQGLSLEVKKGQTLALVGSSGCGKSTV
VQLLERFYDPVAGTVLLDGQEAKKLNIQWLRAHLGIVSQEPVLFDCSIAENIAYGDNSRV
VSQDEIVKAAKAANIHPFIETLPYKYETRVGDKGTQLSGGQKQRIAIARALIRQPQILLL
DEATSALDTESEKIVQEALDKAREGRTCIVIAHRLSTIQNADFIVVLQNGKVKEHGTHQQ
LLAQKGIYFSMVSIQAGTQN
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atggatcttgaggcgggaaggaacggaaccgtcccgtgccccaggagagcggagggcgac
tttgaactgggcggcagcaggaaccaagacaagaaaaaaaagaagagaatgaacctgatc
ggaccattaactttgtttcgatattctgactggcaggataagctattgatgtccctgggc
accatcatggccatagctcatggatcaggtctccccctcatgatgatagtgtttggacaa
atgaccgacaaatttgttgatactgcaggaaacttctcctttccagtgaatttttcattg
tcaatgctaaatccaggcagaattctggaagaagaaatgactaggtatgcatactattac
tcagggctaggtgctggagttctcgttgctgcatatattcaagtttcattttggactctg
gcagctggccgacaggtcaggaaaatcaggcaggagttttttcacactattctacgacaa
gaaataggctggtttgatgtcaacgacaccactgaactcaatacacggttaacagatgac
atctccaaaatcagtgaaggaattggtgacaaggttggaatgttctttcaagcagtagcc
acgttttttgcaggattcatagtagggttcgttagaggatggaagctcacccttgtgata
atggccatcagccctatcctgggactctccacagctgtctgggcaaagatactctcagca
tttagtgacaaagaactggctgcatatgccaaagcgggcgctgtggcagaagaggctctg
ggggccatcaggaccgtgatagcgtttggaggccagaacaaagagctggaaaggtatgag
aaacatctagaaaatgccaagaagattggaattaaaaaagctatttcagcaaacatttcc
atgggcattgccttcctgttaatttatgcatcatatgcgctggccttctggtatggatcc
actctagttatatcaaaagaatatactattggaaacgcaatgacagtctttttttcagtc
ctggttggagccttcagcgtgggacaggctgctccatgcattgatgcttttgccaatgca
agaggagcagcctatgcgatcttcaacatcattgatagcaatcctaaaattgacagtttt
tcagagagaggacacaaacctgacagcatcaaagggaatgtggagttcaatgatgttcat
ttttcttatccagctcgagctaatgtcaagatcttgaagggcctcagcctgaaggttgag
agcgggcagacggtggcgctggttgggaacagcggctgcgggaagagcacaacggtgcag
ctgttgcagaggctctatgaccctgatgagggtaggattagcattgatgggcaggatatt
aggacctttaatgtaaggtacctcagggaaataattggagtggtgagtcaggagccagtg
ctattttctaccacaatcgctgaaaatattcgttatggccgtggaaatgtcaccatggat
gagattaagaaggctgtgaaagaagccaacgcctatgactttatcatgaaactaccacag
aaattcgacaccctggttggagacagaggggcccagctgagcggagggcagaagcagaga
atcgccatcgctcgggccctggttcgcaaccccaagatcctcctgctggacgaggccacg
tcagccctggacactgaaagcgaagctgaagtacaggcggccctggataaggccagagaa
ggccggaccaccattgtgatagcccatcgactgtccactatccgaaacgcagacgtcatc
gccgggtttgaggatggcgtcattgtggagcaaggaagccacagggagctgatgaagaag
gaaggcgtgtacttcaggcttgtgaacatgcagacctcaggaaatcagatccaatcagga
gaatttgaccttgaactaaataatgaaaaggctgctgcagatatggctccaaatggctgg
aaatctcacatatttaggaattctactcgtaaaagccttaggaattcacggaagtatcag
aaaggccttgatgtggaaactgaagaacttgatgaagatgtgccatcagtgtcttttctg
aaggtcttgaaattgaacaagacggaatggccgtactttgtggtcggcacggtgtgcgcc
attgccaatggtgcgcttcagccagcgttttcaatcatattctcagaaatgatagcggtt
tttggaccaggggatgatgaaataaagcagcagaaatgcaacatgttctcattgcttttt
ttaggcctgggaattatttccttttttaccttcttccttcagggcttcacgtttggtaaa
gccggtgagatcctcaccaccaggcttcggtcgttagcatttagagcaatgctaagacag
gacatgagctggtttgatgatcataaaaacagtactggtgcgctttctacaaggcttgca
acggatgcctcccaggtccaaggagccactgggatgaggctggcattaattgcgcagaat
acagctaacctcggaactggtattatcatatcctttatctacggttggcaattgacccta
ctgctgttatcagttgttcccatcattgctgtatcaggaattgttgaaatgaaaatgttg
gccggaaatgccaaaagagataaaaaagaactggaaactgctggaaagatcgcaacggaa
gcaatagaaaatattaggacagttgtgtccttaacccaggagagaaaatttgaatcgatg
tatgttgaaaaattatacggagcttacaggaattctgtgcggaaggcacacatctatgga
attacttttagtatttcacaagcatttatgtatttttcctacgccggttgttttcgattt
ggcgcctatctcattgtgaatggacatatgcgctttagagatgttattctggtgttctcg
gcaatcgtgtttggtgcagtggctctaggacacgccagttcctttgctccagactacgcg
aaagccaagctgtccgcagcccacctgttcatgctgcttgaaagacaacctctgatcgac
agctacggtgaagaaggcctgaggcctgataaatttgaaggaaatgtgacatttaatgaa
gtcgtgttcaattatcccacgcggcccaaagtgcccgtgcttcaggggctgagcctcgag
gtgaagaagggccagacgctggcactggtgggcagcagcggctgtgggaagagcacggtg
gtgcagctccttgagcggttctacgacccagtggctggaacagtgctcctagatggtcaa
gaagcaaagaaacttaacatccagtggctccgagcccacctgggcattgtgtcccaggag
cccgtcctgttcgactgcagcattgctgagaacattgcttacggagacaacagccgggtt
gtgtcccaggatgaaattgtgaaggcagccaaagcagccaacatccatcctttcattgag
accttaccttataaatatgaaacaagagtgggagataagggaactcagctctcaggaggt
caaaaacagaggattgctattgctcgagccctcatcagacaacctcaaatcctgttgttg
gatgaagctacatcagctctggatactgaaagtgaaaagattgtccaagaagccctggac
aaggccagagagggccgcacctgcatcgtgatcgctcaccgcctgtccaccatccagaac
gcagacttcatagtggtgcttcagaacggcaaggtcaaggagcatggcacccatcaacag
ctgctggctcagaaaggcatctatttttccatggtcagtatccaggctgggacacagaac
tga
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integrated database retrieval system
