Amycolatopsis mediterranei S699: RAM_42560
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Entry
RAM_42560 CDS
T01822
Name
(GenBank) D-alanyl-D-alanine dipeptidase
KO
K08641
zinc D-Ala-D-Ala dipeptidase [EC:
3.4.13.22
]
Organism
amn
Amycolatopsis mediterranei S699
Pathway
amn01502
Vancomycin resistance
amn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
amn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RAM_42560
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RAM_42560
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
amn01002
]
RAM_42560
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
amn01011
]
RAM_42560
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
amn01504
]
RAM_42560
Enzymes [BR:
amn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.13 Dipeptidases
3.4.13.22 D-Ala-D-Ala dipeptidase
RAM_42560
Peptidases and inhibitors [BR:
amn01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
RAM_42560
Peptidoglycan biosynthesis and degradation proteins [BR:
amn01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
RAM_42560
Antimicrobial resistance genes [BR:
amn01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
RAM_42560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M15
Motif
Other DBs
NCBI-ProteinID:
AEK46979
UniProt:
A0A9R0UDH8
LinkDB
All DBs
Position
complement(9114953..9115561)
Genome browser
AA seq
202 aa
AA seq
DB search
MNDDFVFVDQLVPGIRWDAKYATWDNFTGKPVDGYLVNRIVGTRTLCAALGEAQEKAASL
GFGLVLWDGYRPQRAVDSFLRWVDQPEDGRTKLWHYPNIDRAAMFAKGYVAAKSGHSRGS
TVDLTLYHLVTGELAAMGGGHDLMDEISHHGARGISRLEAGNRRYLRSIMEDCGFASYER
EWWHYGLKDEPYPDTYFDFPVA
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgacgacttcgtcttcgtggaccagctggtgcccggcatccgctgggacgccaag
tacgccacctgggacaacttcaccggcaaaccggtggacgggtacctcgtcaaccggatc
gtcggcacgaggaccttgtgcgccgcgttgggcgaagcgcaggagaaggccgcgtccctc
ggcttcgggctcgtgctgtgggacggctaccggccgcagcgcgccgtggacagcttcctg
cgctgggtggaccagcccgaggacggccggacgaagctgtggcactacccgaacatcgac
cgggccgcgatgttcgccaaggggtacgtggcggccaagtcgggccacagccggggcagc
accgtcgacctgaccctctaccacctcgtcaccggggagctcgcggcgatgggtggcggc
cacgatctgatggacgagatctcgcaccacggcgcacgggggatctcgcgcctcgaagcg
gggaaccgccgctacctccggtccatcatggaggattgcggattcgcttcgtacgagcgg
gaatggtggcactacggcttgaaggacgagccctacccggacacgtacttcgacttcccg
gtcgcgtag
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