Amphiprion ocellaris (clown anemonefish): 111572887
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Entry
111572887 CDS
T06018
Symbol
bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111572887 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoce03019
]
111572887 (bard1)
04121 Ubiquitin system [BR:
aoce04121
]
111572887 (bard1)
03036 Chromosome and associated proteins [BR:
aoce03036
]
111572887 (bard1)
03400 DNA repair and recombination proteins [BR:
aoce03400
]
111572887 (bard1)
Messenger RNA biogenesis [BR:
aoce03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
111572887 (bard1)
Ubiquitin system [BR:
aoce04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
111572887 (bard1)
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
111572887 (bard1)
DNA repair and recombination proteins [BR:
aoce03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
111572887 (bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
Ank_2
zf-RING_6
Ank_3
Ank_4
Ank_5
BRCT_2
BRCT
zf-RING_5
zf-C3HC4_3
zf-RING_10
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
111572887
NCBI-ProteinID:
XP_023132529
Ensembl:
ENSAOCG00000012449
LinkDB
All DBs
Position
Unknown
AA seq
883 aa
AA seq
DB search
MDDNVGVHMKDWENTKEAVANFRRLLLCSKCSSLMKEPVCLGMCEHMLCRSCAGLQAGDG
CMVCHSPAWVKDIQINRQLSSVVQLFCDLESLLNPVKQPDSSVGEIQTQPESSIFKNKKN
FKIWFSPRSRKVRCTVEKPSDATVADGGTPGKTAAAQLSTLTAQRQDLSVFNFTLSSQDS
GSSSSSQRCHSENRNRKKRSNKKNDTSRSVVVQGASRSTRKQTKQNMKKKMLEAINQKWG
ITEQVHASSENEQPSADGARRSSKRVSFLTPPVTSDEPQPEVAKGSANELSPTRSTMRES
LSGGSITVLNYQTQPGQSMSNSGVQDDKVSASDPNPNDSPDRWDTLSPTELSSKRSRVAE
KNCTLESTPKRPRASPGRRRKSVGQMSPAVLNPLSLTSPRCDKNIKTSRGEVGSSPSALH
IMINESHRKSPCSPGASGGRPSSGSPAVMKRNHKGETPLHLAAIKGDVEAVKELLDQGAD
PNLKDNAGWTPLHEACNLGHLAVVEVLISRGALLNTPGYENDSPLHDAVRNGHPAIVKLL
VQFGASQNVLNLYGKRPADYAVSLEMLEIFQEASEGTQYANAHTSRSPSASLTVVNECVR
RDQSVMFLATKLSRAEQHKLAKLGPLLGGRTADAFSGSVSHVVVPEGQMPTTYSTLLGVL
AGCWVVRYSWVEACLQAGQWMPEAEHEAGEGPQRSRINRCSLLPPLFDGCFFFLLGSFKA
PAKDELTRLIREGGGQLLSRQPKPDSDVTQTLSAAAYHALPGSDQALCTQYVIFDPQGPH
KPAVVRRGKVWSAPSTWIINCIAAFRLLPVADPQIVLGAAIKQPIHHRPGIGSKRLTGAD
FLEMEKILVMNGMSLRKFTFELMASIYHLKNIVFWALVGCFFF
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggatgataatgtcggcgtgcacatgaaggactgggagaacactaaggaggcggtggca
aactttcgacgactgctgctttgttccaaatgctcgagtttaatgaaggaacctgtttgt
ctgggaatgtgtgagcatatgctgtgcaggtcctgtgctggcctccaggcaggagatggc
tgcatggtgtgtcatagtcctgcgtgggtgaaggacatccaaatcaacaggcaactaagc
agcgtcgtacagctcttctgtgatttagagtccctgctcaatcccgtaaaacaaccagac
tcctctgtgggtgagattcaaacacagcctgagagctccatttttaaaaataagaaaaac
ttcaagatctggttcagtccccgtagccgtaaggtacgctgcaccgtggagaagccttca
gacgccactgtagcagacggcgggactcctggaaaaacagctgcagcacagctaagcacc
cttactgctcaacggcaggacctgtcagttttcaatttcaccttgtcctcccaagactcc
ggctcttcttcttcttctcagagatgccacagcgaaaacagaaacaggaagaagaggtca
aataagaaaaatgacaccagcaggagtgtggtggtgcaaggagccagcagatccacacgt
aaacagactaagcagaatatgaagaagaagatgcttgaggctataaaccagaaatgggga
attacggagcaggtacatgcctcatctgaaaacgagcagcccagtgctgacggggcaaga
aggtccagtaaaagggtttcttttctaacccctcctgtcacctctgatgagcctcagcct
gaagtggcaaaggggagtgctaatgaactcagtcctaccagaagcacaatgagagagagt
ctctcagggggcagcatcactgtactgaattaccaaactcagcccggacaaagcatgtcg
aacagtggtgttcaggatgacaaagtgtcagcaagtgaccccaacccaaatgacagtccc
gacagatgggacaccttatctccaacagagctttcctcaaaaagatccagagtggcggag
aaaaactgcaccttggaaagcactccaaaaagaccaagggcttctccaggccgaaggaga
aaatcagtgggtcagatgtctccagctgtccttaatcctttatctttgactagcccccgg
tgtgataagaatatcaaaacctctagaggagaagtgggaagcagcccctctgccttacac
atcatgatcaatgaaagccacagaaaatctccctgttctcctggtgcatctggtggacgg
cccagctcgggaagccctgcagttatgaagaggaaccacaagggagagaccccgctgcat
ctggctgcaataaagggagatgtagaagctgtcaaggaactgctggaccagggggctgac
cccaacctgaaagataacgctgggtggacacctctgcatgaagcatgtaacctgggtcac
ctggcagttgtggaggtgttgatctcaagaggagccctattgaacacgcctggctatgaa
aacgactctccactccacgatgctgtgaggaatggacatccagccattgtgaaactgctt
gtgcagtttggtgcctcgcagaatgtcctcaatctgtatggaaagcgccctgcagattat
gcagtgagtctggagatgctggagattttccaagaagcctcagaaggaacccaatatgct
aatgctcatacatctcgtagcccttcagccagcctaacagtggtgaacgagtgtgtgagg
agggatcaaagcgtgatgtttttggccactaagctgtcacgggcggagcaacataagctg
gccaaactgggaccgctactgggagggaggacggctgatgctttttctggctcagtgagc
catgttgtggtgccagaaggacaaatgcccaccacctactccaccctcctgggtgttctt
gctggctgctgggttgtcagatacagctgggtggaggcatgtctgcaggcagggcaatgg
atgcctgaagctgagcatgaagcaggagaaggcccccagcgcagtcgcatcaacagatgt
agcttgcttccgccgctcttcgatggctgtttcttcttcctgctcggctcctttaaggct
cccgccaaagacgagctcaccaggctgatccgggagggaggaggtcagctcctgagccgg
cagccgaagccagacagcgacgtgacacaaaccctgagcgctgcagcctaccacgccctg
ccgggctctgaccaggccctctgcacccaatacgtcatctttgacccccagggccctcac
aagcctgcagtggttagacgaggcaaggtgtggtcagctccctccacctggatcatcaac
tgcattgcagccttccgcctcctcccagtggcagaccctcaaatagtgctgggagctgct
attaagcagcccatccatcaccgcccaggaatagggtctaaaaggttaacgggagcggat
tttctggaaatggaaaaaattcttgtgatgaatggcatgagcttacggaaattcaccttt
gaattaatggctagtatttatcatctcaaaaacatcgtgttttgggccctggttggatgc
tttttcttttag
DBGET
integrated database retrieval system
