Agrilus planipennis (emerald ash borer): 108738027
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Entry
108738027 CDS
T07419
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108738027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apln03019
]
108738027
04121 Ubiquitin system [BR:
apln04121
]
108738027
03036 Chromosome and associated proteins [BR:
apln03036
]
108738027
03400 DNA repair and recombination proteins [BR:
apln03400
]
108738027
Messenger RNA biogenesis [BR:
apln03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
108738027
Ubiquitin system [BR:
apln04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
108738027
Chromosome and associated proteins [BR:
apln03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
108738027
DNA repair and recombination proteins [BR:
apln03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
108738027
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_4
Ank_2
Ank
Ank_3
Ank_5
zf-RING_UBOX
zf-RING_5
zf-C3HC4
DUF535
zf-C3HC4_2
zf-RING_6
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
108738027
NCBI-ProteinID:
XP_018326740
UniProt:
A0A1W4X341
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MDTFEEQILDLTEELKFQLTCNTCYDVSKTFVLPCNHSFCENCLNKMKYCCSECKQPFSA
QDAEEDSFSNGVLEHLEAIKGILSECSDTVNESQWKKIKLPCELSGYKLVLRFEIKKNHK
GETPLHIACKKNNVEYVSRIINNGVDINTKDYAGWTPLHEAVVGKSIQCANSLLEAGALP
SVPGEWYITPLHKAVSINNKEMIELLLLHGADPQAVDYSGKTPIDWCTSKETVSILENRT
QKLTIPRRLYLYPWPQVFLDKRIDNKFSETLDVHYKDLDALKKGQITHYVITNRESEDPK
INLFHLALAIVQGASVVTEKWLTDFLLTQNDYLGFGYIVKEREDTIKRSVINRIKCNPKL
FDGINFSFGVSNKSHKIMNINFSKDDLIALATIGGGKILTREPALRTVENQFNYPFHVNK
SSEFAGCCNFIIYDESSPPQLLYNMKELKHKSSTWLIECIMSFSIVS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggatacctttgaagaacaaattttagatttaacagaagaattaaagtttcaattaact
tgtaatacttgttacgatgtttccaagacttttgttttaccatgtaaccatagtttctgt
gaaaattgtctgaataaaatgaaatattgttgttcggaatgtaagcagcccttttcagca
caagatgctgaagaagactcattctcaaatggagttttagagcacttagaagccataaaa
ggaatactttctgaatgtagtgatactgttaatgaaagtcaatggaagaaaataaaacta
ccttgtgagctttctggatataaattggtgttgagatttgaaattaaaaaaaaccacaaa
ggtgaaactcctttgcatattgcatgcaagaaaaataatgtggaatatgtctctagaatt
attaataatggagtagacattaatacaaaagactatgctggatggacaccattgcatgaa
gctgtagtaggcaagagtattcaatgtgctaactctttactagaagccggagctttgccg
agtgtcccaggagaatggtatattacaccacttcataaagcagtttctataaataataaa
gaaatgattgaattattattacttcatggtgcagatcctcaagctgtggattattctgga
aagacacctattgattggtgtacttcaaaagaaactgtttctatcctggaaaataggaca
caaaagttaactatcccccgccgtttgtatttgtatccgtggccgcaagtttttctggat
aaacgtatagataacaaattttctgaaacattagatgtccattataaagatttagatgca
ctcaagaaaggtcaaataacacactacgttataacgaatagggaatcagaggaccctaaa
ataaacctgtttcatttggcattagcaatagtgcaaggagccagtgtagttacagaaaaa
tggttgaccgattttcttcttacccagaacgattacctgggatttggatatattgtgaaa
gagagagaagataccattaaaaggtcagtaattaatagaataaaatgtaacccaaaattg
tttgatggcataaacttctcctttggtgtttctaataaatctcataaaattatgaatata
aatttttcgaaagatgatttaattgctttagcaactattggtggaggtaaaatattaact
cgtgaacccgcacttagaactgtagaaaatcagttcaattatccatttcacgttaataaa
agttcggagttcgcaggctgttgtaacttcattatttatgatgagagtagccctccacaa
ttgttgtacaatatgaaagaactgaaacacaagtcttctacttggttaatagagtgtata
atgagtttctcaatagtttcataa
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