Candidatus Arthromitus sp. SFB-rat-Yit: RATSFB_0043
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Entry
RATSFB_0043 CDS
T01624
Name
(GenBank) putative peptidase M15D vanX D-ala-D-ala dipeptidase
KO
K08641
zinc D-Ala-D-Ala dipeptidase [EC:
3.4.13.22
]
Organism
asb
Candidatus Arthromitus sp. SFB-rat-Yit
Pathway
asb01502
Vancomycin resistance
asb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
asb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RATSFB_0043
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RATSFB_0043
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
asb01002
]
RATSFB_0043
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
asb01011
]
RATSFB_0043
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
asb01504
]
RATSFB_0043
Enzymes [BR:
asb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.13 Dipeptidases
3.4.13.22 D-Ala-D-Ala dipeptidase
RATSFB_0043
Peptidases and inhibitors [BR:
asb01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
RATSFB_0043
Peptidoglycan biosynthesis and degradation proteins [BR:
asb01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
RATSFB_0043
Antimicrobial resistance genes [BR:
asb01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
RATSFB_0043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M15
VanY
Peptidase_M15_4
Motif
Other DBs
NCBI-ProteinID:
BAK80605
UniProt:
G2IFM7
LinkDB
All DBs
Position
complement(62037..62774)
Genome browser
AA seq
245 aa
AA seq
DB search
MSILILSFSILLIGGGLYYTYDSLTQIDKKITINNFKNTTESLYNFDVSINGLKLLNSFH
HDMSLDIRYASKNNFTHTVLYDADACILQENTLKKLLNAQEEFKSLGYKIKIWDAYRPFY
IQKILWDIVPNSNYIANPYTGGSNHNRACAVDITLTDLNDIEINMPTGFDEFSDRAHRSY
IGASEIQIKNAELLKNIMIKHGFKPIYTEWWHFDDANYSNYPIINISINEYLQIINTKMK
GGELQ
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgtctatacttatactatcatttagtattctccttataggaggaggactttattacaca
tatgattcattaacgcaaattgataaaaagattacaattaataattttaaaaatacaaca
gaatctttatataattttgatgtatctataaatggtcttaagctattgaattcatttcat
catgacatgagtttagatattagatatgcctctaaaaataattttacacatacagtactt
tatgatgctgatgcatgtatactacaagaaaatactcttaaaaaattattaaatgctcaa
gaggaattcaaatcacttggatacaaaataaaaatatgggatgcatatagacccttttat
atacaaaaaatattatgggatatagttccaaatagtaactatatagctaatccctatact
ggtggatctaatcataatagagcatgtgctgttgatattacactgactgatttaaacgat
atagaaataaatatgcctactggttttgacgaattttcagatagagctcacaggagttac
ataggtgcatctgaaatacaaataaagaatgcagaactcctaaaaaacataatgataaaa
catggttttaaaccaatatatactgaatggtggcattttgatgatgctaattattctaat
tatcctataattaatatcagcataaatgaatatcttcaaattataaatactaaaatgaag
ggaggtgaattgcaatga
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