Aegilops tauschii (wheat D): 109779458
Help
Entry
109779458 CDS
T04345
Name
(RefSeq) histone deacetylase 15 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
ats
Aegilops tauschii (wheat D)
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ats01009
]
109779458
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ats03019
]
109779458
04131 Membrane trafficking [BR:
ats04131
]
109779458
03036 Chromosome and associated proteins [BR:
ats03036
]
109779458
Enzymes [BR:
ats01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
109779458
Protein phosphatases and associated proteins [BR:
ats01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109779458
Messenger RNA biogenesis [BR:
ats03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
109779458
Membrane trafficking [BR:
ats04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
109779458
Chromosome and associated proteins [BR:
ats03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
109779458
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zinc_ribbon_2
Motif
Other DBs
NCBI-GeneID:
109779458
NCBI-ProteinID:
XP_020193668
LinkDB
All DBs
Position
Unknown
AA seq
612 aa
AA seq
DB search
MTSNMRPLNSKKGEVPSHGRENCGVSDQAFHGNCQSCDGVGKPSYPRANGVSLKESGTCS
FSCDHANALLVDVPKGSPARPGHIDSADCGQHAKNESCMPCNDLQQESDREQAGDTLDDL
FFFNDEEDDDIDWEPSARLAENRWFCLNCTMPNLDEVKHCLNCHELKGSEVAAGYDVFKT
HIARAALVSADTAPVLVSTAIGFDERMLLHSEMEMKPNPHPERPNRLRAIAASLAAAGIF
PSKCALVPPREITKEELVMVHTSDHVESVEQTKNMLYSYFTSDTYANGHSACAAKLAAGL
CADLASLIVSGRVRNGFALVRPPGHHAGVKQAMGFCLHNNAAVAALAAQKAGAKKVLIVD
WDVHHGNGTQEIFEGNKSVLYISLHRHEDGSFYPGTGAADEVGDLDGKGFSVNIPWSCGG
VGDNDYIFAFQHVVLPIATEFAPDITIISAGFDAARGDPLGCCDVTPAGYSQMTSMLTAC
SEGKLLVILEGGYNLRSISSSATEVVKVLLGHGPSYGTDAAAPSKEGMQTVLQVLDIQQK
YWPVLVPIFASLQVQAQQGPTSSNYVNAENMLKRRMLTGGPGPVWWKWGSKRLLYEVLFE
GRRPRKSKAKGK
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgacatccaatatgagaccgcttaacagcaaaaagggtgaggtcccttcccatggtcgt
gagaactgtggagtttctgaccaagcttttcatggcaattgtcaaagctgtgatggtgtt
ggaaaaccatcttatcctagagcgaatggtgtttccctgaaagaaagtggaacatgcagt
tttagttgtgatcatgctaatgctttattagtagatgtgcccaaaggttcgccagcaagg
ccaggacatattgacagcgcagattgtggtcagcatgccaagaatgaaagttgcatgcct
tgtaatgatctgcagcaagagtctgatagagaacaagctggagataccctggatgatctg
tttttctttaatgatgaagaggatgatgatattgactgggaaccttctgctcgcctggct
gaaaacagatggttttgcttgaactgtacaatgccaaatttggatgaggttaaacattgc
ctgaattgccatgagcttaagggatctgaggtagctgctggatatgatgttttcaaaact
cacattgcgcgggcagctttggtatctgctgacacagcaccggtactggtatctacagcg
attggttttgatgaaagaatgttgctccacagtgagatggaaatgaaaccaaatccacat
ccagaaagacccaaccgtcttcgtgcaattgctgctagtctggctgctgcaggaatattt
ccctcaaagtgcgccttggtacctcctcgagaaatcactaaggaggaactcgtaatggtc
catacttcagatcacgtcgaaagcgtagagcagacaaagaacatgctttacagttacttc
acttcggatacctacgcgaatggacactcagcatgtgctgccaaacttgcagcaggcttg
tgcgctgatcttgctagtttgatagtgtctggccgtgtccggaatggctttgcgctggtg
agacctcctgggcatcatgctggggtaaagcaagccatgggcttttgtcttcacaacaat
gcagcagtggctgcattagctgcacaaaaagcaggcgctaagaaagtcttgatagttgac
tgggatgtgcaccatggcaatggcacacaggagatatttgaagggaacaaatcagtcttg
tacatatcattacatcgccatgaggatggaagcttctatcctggaactggagcagcagac
gaggtgggagatctggatggtaaaggattctcggtaaatataccttggagctgtggtggt
gttggtgacaatgattacatctttgcttttcagcacgtggtgcttccaatagctacggaa
tttgccccagacatcaccattatatctgcaggatttgatgcagcaaggggtgatcctctg
ggttgttgtgatgttactcctgccggatactctcagatgacgtccatgttaactgcttgc
tcagaaggaaaattgttggttatacttgagggaggatacaatcttcggtctatatcctca
tctgcaactgaagttgtcaaggttctactcgggcacggtccaagttatggcacagatgca
gcagcaccatcaaaggagggcatgcagactgtcttacaagttctggacatccagcaaaaa
tattggccagttttagttccaatctttgcatcacttcaagttcaagcgcagcaggggccg
acttcttccaattatgttaacgctgaaaacatgctgaagagaaggatgctcaccggagga
ccagggcccgtgtggtggaaatggggaagcaagaggcttttgtacgaagtactgtttgag
ggccgccgtccgagaaagagcaaggcgaaaggaaaatga
DBGET
integrated database retrieval system
