Burkholderia ambifaria AMMD: Bamb_4016
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Entry
Bamb_4016 CDS
T00398
Name
(GenBank) peptidase M15D, vanX D-ala-D-ala dipeptidase
KO
K08641
zinc D-Ala-D-Ala dipeptidase [EC:
3.4.13.22
]
Organism
bam
Burkholderia ambifaria AMMD
Pathway
bam01502
Vancomycin resistance
bam02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Bamb_4016
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Bamb_4016
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bam01002
]
Bamb_4016
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bam01011
]
Bamb_4016
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
bam01504
]
Bamb_4016
Enzymes [BR:
bam01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.13 Dipeptidases
3.4.13.22 D-Ala-D-Ala dipeptidase
Bamb_4016
Peptidases and inhibitors [BR:
bam01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
Bamb_4016
Peptidoglycan biosynthesis and degradation proteins [BR:
bam01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
Bamb_4016
Antimicrobial resistance genes [BR:
bam01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
Bamb_4016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M15
VanY
Peptidase_M15_4
Motif
Other DBs
NCBI-ProteinID:
ABI89569
UniProt:
Q0B8F4
LinkDB
All DBs
Position
2:933461..934024
Genome browser
AA seq
187 aa
AA seq
DB search
MNPPRLVEITPATHRVEIDLVYATERNLTGKPIYRRAHCLLLEPAEAALRRAVDVAAQAG
FTLRIYDAYRPPQAQQVLWDFLPDPNFIADLGRGSNHSRGTALDLTLVGAHGEPLDMGTG
FDEMVAASGHFHAGLPEPVQRNRLLLLGVMHAAGFAHIDSEWWHYELPGSHALPPIDNAA
SGPWRLM
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgccccgcctcgtcgaaatcacgcccgccacgcatcgcgtcgagatcgatctc
gtctacgcgaccgagcgcaacctgaccgggaagccgatctatcgccgcgcgcactgcctg
ctactcgaaccggccgaggccgcgctgcgccgcgcggtcgacgtcgccgcgcaggccggc
ttcacgctgcgcatctacgacgcataccggccgccgcaggcgcagcaggtgctgtgggat
ttcctgcccgatccgaacttcatcgccgatctcggccgcggctcgaatcacagccgcggc
accgcgctcgacctgacgctcgtcggcgcgcacggcgagccgctcgacatgggcaccggc
ttcgacgagatggtggccgcatcgggccatttccacgcggggttgcccgagccagtgcaa
cgcaaccggctgctgttgctcggcgtgatgcatgcggccggcttcgcgcatatcgacagc
gaatggtggcactacgaactacccggatcgcatgcgttgccgccgatcgacaacgcggcg
agcggcccgtggcggttgatgtga
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