Bubalus bubalis (water buffalo): 102397989
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Entry
102397989 CDS
T05912
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X2
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04613
Neutrophil extracellular trap formation
bbub05014
Amyotrophic lateral sclerosis
bbub05034
Alcoholism
bbub05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
102397989 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
102397989 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102397989 (HDAC6)
09165 Substance dependence
05034 Alcoholism
102397989 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bbub01009
]
102397989 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102397989 (HDAC6)
04131 Membrane trafficking [BR:
bbub04131
]
102397989 (HDAC6)
03036 Chromosome and associated proteins [BR:
bbub03036
]
102397989 (HDAC6)
Enzymes [BR:
bbub01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
102397989 (HDAC6)
Protein phosphatases and associated proteins [BR:
bbub01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102397989 (HDAC6)
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
102397989 (HDAC6)
Membrane trafficking [BR:
bbub04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
102397989 (HDAC6)
Chromosome and associated proteins [BR:
bbub03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
102397989 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
102397989
NCBI-ProteinID:
XP_025132479
EnsemblRapid:
ENSBBUG00015024436
LinkDB
All DBs
Position
X:complement(55829963..55851484)
Genome browser
AA seq
1036 aa
AA seq
DB search
MTSTGQDSTTPKERRNRHNPHSPTHDSSITSKRGVKKGAILRSSPSLAEVKKKGRMKKLS
QTAEQDLIMGLQGLNLNLEARTLSGTGLVFDEQLNEFHCLWDDSFPERPARLHAIKEQLI
QEGLLDRCVSFQARFAKKEELMLVHSLEYIDLMETTQYMNEEELHVLADTYDSVYLHPNS
YTCACLASGSVLRLVDAVLEAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQ
KHDIQRVLIVDWDVHHGQGIQFAFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGLGQG
QGYTINVPWNQVGMQDADYIAAFLHVLLPVAFEFQPQLVLVAAGFDALQGDPKGEMAATP
AGFAQLTHLLMGLAEGKLILSLEGGYNLRSLAEGVSASLHTLLGDPCPVLESPGAPCPSA
QASLSCTLEALEPFWESLVRSVESLEEKDTVEKDDVEEEEERLPQSPELSVPIWPVLQAR
TGLVYDQQMMDHHNLWDNYHPEMPQRIHFIMHHLDELGLAKRCHSLPARPATDAELLTCH
SAEHLERLRATEKMKTRELRREGANYDSIYICSSTFACAQLAAGAACRLVEAVLAGEVLN
GVAVVRPPGHHAEPDAACGFCFFNSVAVAARHAQAISGHALRILIVDWDIHHGNGTQHIF
EEDPSVLYISLHRYDHGTFFPMGNEGACTRIGKATGTGFTVNVAWNGPHMGDADYLAAWH
RLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHQLMGLANGHIILILEG
GYNLTSISESMAACTRSLLGDPLPLLTRLRPPLSGAQASITKTIQVHRRYWRSLRVMKRK
NKEELSSSKLITKKPSQPASSGLANVTTTVEGNILEAGMGQAASEASVKESTPDQTESAR
APVELTQSQSSDTATQGAALDQTISEGATGGAELIQNPPASCINNRIPPALPVQGATAQT
SPSKLMTNLRILDLDSTTQEPSEEEGLLGEAAGGQDTNESVPVQVFGDHADTDEDLLAVK
NIAHQNKFGEDIPHSD
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaccggtcaggattccaccacacccaaggagcgaaggaataggcacaatccc
cactcccccacccacgactccagcatcacctcgaagcgaggtgttaaaaagggtgccata
ctccgctccagccccagtctagcggaggtaaagaagaaaggcagaatgaagaagcttagc
caaacagccgagcaagacctaatcatggggctacaagggctgaatctgaacctggaggcc
aggacactgtctggcactggcttggtgttcgatgaacagctaaatgaattccactgcctc
tgggatgacagcttcccggaacgcccagcacggctccatgccatcaaggagcaactgatc
caggagggcctcctggaccgctgcgtgtcctttcaggcccgattcgccaaaaaggaggag
ctgatgttggttcacagcctagaatatattgatctgatggaaacgacccagtacatgaac
gaggaggagctccacgtcctagcagatacctatgattcagtttatctgcatccgaactca
tacacctgtgcctgcctggcctcaggctctgtcctcaggctggtggatgcagtcctggag
gctgagatccggaatggcatggccatcatcaggcctcctggacaccacgcccagcacagt
ctcatggatggatattgcatgttcaaccacgtggccgtggctgcccgttacgctcaacag
aagcatgatattcagagggtccttatcgtggattgggatgtgcaccatggtcagggaata
cagttcgcctttgaccaagatcctagtgtcctctatttctccatccaccgctatgagcag
ggtcggttctggccccatcttaaggcctctaattggtccaccacgggtttaggccaaggc
cagggatacaccatcaacgtgccttggaaccaggtggggatgcaagatgctgactacatc
gccgctttccttcacgtcctcctgccagttgcatttgagttccagccccagctggtcctg
gtagccgctggatttgatgccctccaaggggaccccaagggtgagatggccgccactcca
gcagggttcgcccagctcacccatctgctcatgggtctggcagaaggcaagctgatcctc
tcactggagggtggctataatctccgctctctggctgaaggtgtcagcgcctccctccac
acccttctgggtgacccttgtcctgtgttagagtctcctggtgctccctgcccaagtgcc
caggcatcactctcctgtactctggaagccctggaacccttctgggagagccttgtgaga
tcagttgagagcctggaagaaaaggacactgtggagaaggatgatgtggaagaggaggaa
gagagactgccacagtcccctgagctctccgttccgatatggccggtgctgcaggctcgc
acggggttggtctatgaccagcagatgatggaccaccacaacttgtgggataactaccac
cctgagatgccccagcggatccactttatcatgcatcacctggatgaactgggccttgcc
aagcgctgccactccctgcccgcaaggcccgctacagatgctgagctgctcacctgccac
agtgctgagcacttggaacgtctacgggccacggagaagatgaagacccgggagctgcgc
cgggagggtgccaactatgactccatctacatctgctccagcacttttgcctgcgcacag
ctggctgcaggggccgcctgtcgcctggtggaggcagtactggcaggagaggttttgaat
ggcgttgctgtagtgcgacctcctggccaccatgcagagccggatgcagcttgtggtttc
tgtttttttaattctgtggctgtggctgctcgccatgcccaggccatcagtgggcatgcg
ctgcggatcctgatcgtggactgggacatccatcatggtaatggaactcagcacatattt
gaggaggaccccagtgtgctgtacatttccctgcaccgctatgatcatggtaccttcttt
cccatggggaacgagggtgcctgtacccggataggtaaagctacaggcacaggattcact
gtcaatgtggcctggaatggaccccacatgggtgatgctgactacctggctgcctggcac
cgtctggtgcttcctattgcttacgagtttaacccagaactggtgctggtctcagctggc
ttcgacgctgctcggggggatcctctgggaggctgccaggtgtcgcctgagggctatgcc
cacctcacccaccagctgatgggcttggccaatggccatatcatcctaatcctagagggt
ggttataacctgacatccatctcagagtccatggctgcctgcactcgctccctccttggg
gatccactgcccctgctcacccggctgcggcccccactatctggagcccaggcttccatc
actaaaaccatccaagtccatcgaagatactggcgcagtttgcgggtcatgaagcgcaaa
aacaaagaggaactctccagttctaagttgatcaccaagaagccatcccaaccagccagt
tctgggttagccaatgtgacgaccacagtggaagggaacatcctggaggcaggcatggga
caggccgcctcagaagcatctgtgaaagagtccactccagatcagactgagtcagcgaga
gctccagtagaacttactcagagccagtcctcagacacagccacacaaggagctgcactg
gaccagaccatctcagagggggccacagggggagctgaactgatccaaaaccctccagcc
tcatgcatcaacaacaggattcctcctgccttacccgtgcaaggagccacagcccagaca
tcccctagtaagctgatgacaaacctcagaatactggacctagatagcacgactcaggag
ccctcagaagaggaaggactactaggagaggcagctggaggtcaggacacaaatgagtca
gtgccagtgcaggtctttggagatcatgctgacactgacgaggatctcctagcagtgaag
aacatcgcccaccagaacaagtttggggaagacataccccattcagactaa
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integrated database retrieval system
