Bradysia coprophila: 119070608
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Entry
119070608 CDS
T08269
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
bcoo
Bradysia coprophila
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bcoo01009
]
119070608
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcoo03019
]
119070608
04131 Membrane trafficking [BR:
bcoo04131
]
119070608
03036 Chromosome and associated proteins [BR:
bcoo03036
]
119070608
Enzymes [BR:
bcoo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
119070608
Protein phosphatases and associated proteins [BR:
bcoo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119070608
Messenger RNA biogenesis [BR:
bcoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
119070608
Membrane trafficking [BR:
bcoo04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
119070608
Chromosome and associated proteins [BR:
bcoo03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
119070608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
119070608
NCBI-ProteinID:
XP_037030922
LinkDB
All DBs
Position
X
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AA seq
1068 aa
AA seq
DB search
MSSPVVTRRGAQKAKIQTRGMVKQEEARKPSAALLEAKKKAREKLNTSAKRPSGEGVLIR
DIYQSMMDSIQMVRGETGLIYDDRMAEHRCLWDPKFPECPERFTRVVDRCQELKLIERCR
RLTPRDATVDEILTKHTKDHYELLKNTSQCTNEERLEELSSKFDAIYIHPTTFQLSLLAV
GSTIELVDNILSNKIQNGMAIIRPPGHHAMKAEYNGYCFFNNVAIAAQHALDNRGLNRIL
IVDWDVHHGQASQRMFYDDPRVLYFSIHRYEHGMFWPNLRESDFDWIGDGDGRGFNFNIP
LNRTGMTNADYLAIFQQILIPVAIEFQPELVIVSAGYDAAYGCPEGEMEITPACYPHLLS
PLLTLANGNVAVVLEGGYCLQSLAEGAALTLRTILGDPCPTLVEPLSEPCDSIQETILNC
IQLHRPHWNCLQTNGTYTLEEYNNFTPQSDLHKVVQAYNWTEPRQERFLTRDCYPVQSEE
FLKKVAERLTSLSIATNLSVPPNRVCYVYDEMMLLHRNLYEDHPERPERLEMIEQRFKEY
NLFERLRRLPVRSATTDELCLAHTRLHINSMRKIVESKELQESGEKFNSVYFHPKTFECA
CVAAGSVLQVVDDVLNGNSRSGVCVIRPPGHHAESDLPHGFCIFNNVAVAAQYAVRDHGL
KRVLIVDWDVHHGNGTQHIFESSPNVLYVSIHRYDYGHFFPRSEDANFNVVGEGSGTGFN
VNIPWNAKGMGDMEYIAAFQRIILPIAYEFAPELVLISAGFDAALGDPLGGCKVTPEAYG
YFTHWLSALANGKIIVCLEGGYNVNSISYAMAACTKALLGDPLPVLLTNKRLNSSCVETI
QNVLSVQQKYWRSLRFNKKLPNFEIQRSPIDDLYKEFNKVNIAEKKASDGDTNSGKKGDS
SPGTSRDVQPSTSTAAASNSSAAKTLAEFLAENKNALQNEEMFAVYPLKNCPHLSSLNPD
LFDSIDTTKSCMECQSTSENWICLGCAQVFCGRFVNEHMLYHHLDSDHPLTLSFADLSVW
CYKCDSYIDNPCLFKYKNLAHQSKFGEEMVWSYGNTLELDAQSSSTLS
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaccagtagttacacgacgaggtgcacaaaaagcgaaaatacagacgcgtggt
atggtcaagcaggaggaagctcgcaaaccgagtgcagctttgttagaggcgaaaaagaaa
gctcgtgagaaattaaacactagcgctaaacgtccatcaggtgaaggggttttgattaga
gatatttaccagtctatgatggactcgatacaaatggttcgcggtgagactggcttaatt
tacgatgatcgaatggctgagcaccggtgtttgtgggatccgaaatttcctgaatgtcct
gaaagatttacgcgagttgtcgatagatgccaagaactcaaattaatcgaacgttgtcga
agactgacaccgcgtgatgccacagtcgacgaaatattaacgaaacacacgaaagatcat
tatgaattgctcaaaaacaccagccagtgcacgaatgaagagagattggaagaactgagc
tcaaagttcgatgcaatttatattcatccgacaacattccaactatctctactcgccgtt
ggtagtaccattgaactggtggacaatattttatcgaataaaatacaaaatggtatggcc
ataatcaggccacctggtcatcatgccatgaaggccgaatacaacggctattgtttcttc
aacaatgttgccatcgcggctcaacatgcgctagacaatcgtggcttaaatcgcatttta
attgttgattgggatgtccatcacggtcaagcgtcacagcggatgttttacgatgatccg
agagttttatacttttccatacatcgttacgagcacggcatgttttggccgaatctgcgt
gaatctgatttcgattggattggggatggtgacgggaggggattcaacttcaatatacct
ttgaaccggacgggaatgacgaacgctgattatttggccatttttcaacagattctaatt
ccagttgctattgagtttcagccagaattagtcattgtatcagctggctatgacgcagcg
tacggatgccctgagggtgaaatggaaataacaccggcatgctatccacacctactatca
ccactgctaactttggccaatggaaacgttgcagttgttttggaaggaggatattgcttg
caatcattggcagaaggagccgctctgacgctcagaacaatccttggcgatccgtgcccg
accctggttgaaccactaagcgaaccatgtgatagcattcaagaaaccattttaaattgt
attcaactacaccgtccacactggaactgcctacaaacgaatggaacatataccttggaa
gagtataacaattttacacctcaaagtgatctgcataaggtggtgcaagcgtacaattgg
accgagccaaggcaagaacgatttttaaccagagattgttatcccgtccagtctgaagaa
tttctgaaaaaagtggccgaacgattgacttcattaagcattgcgacgaatctaagtgtt
ccgccaaatcgagtctgctatgtctacgacgaaatgatgttacttcacaggaacctttat
gaagatcatcctgagcgaccagaacgacttgaaatgatcgagcaacgattcaaagagtac
aatctgttcgaacgtctgcgcaggctgccggtgcgtagtgctacaaccgatgaactgtgt
ctagctcataccagactacacatcaattcaatgcgtaaaattgtggaatcgaaagagctg
caagagagtggcgagaaattcaattccgtttatttccatccgaaaacgtttgagtgtgcg
tgcgtcgctgccgggtcagtgcttcaagtggtcgatgacgttttaaatggaaatagtcga
agtggtgtctgtgtgattcggccaccgggacaccatgcggagtcggatctacctcacgga
ttttgtatatttaataatgtggctgttgcggctcaatatgcagtcagggatcacggactc
aaacgagtccttattgtcgactgggacgtccatcacggaaatggcacgcagcacattttc
gaatcaagtccaaacgtcctgtatgtgtcgatccatcgatacgactacggacatttcttt
ccacggagcgaagatgcaaatttcaatgttgtcggtgagggcagtggaaccggtttcaat
gtgaacatcccgtggaatgctaaaggaatgggtgacatggaatacatagctgcctttcaa
cgtatcattttgccaattgcttatgagttcgcacccgaactggtgttaatcagtgccggt
ttcgatgctgctctcggagatccattgggcggctgcaaagtgacaccggaagcgtacggt
tacttcactcattggttgtcagcgttagccaatggaaaaataattgtgtgccttgaaggc
ggttacaatgtcaattccatttcctatgcaatggctgcctgcacgaaagcattgttaggc
gatccactacccgtcctgctgacaaataaacgactcaattccagttgcgtcgagaccatt
caaaatgtactatccgtacaacagaagtactggcgttccttgcgattcaacaaaaagttg
cccaactttgagatacaacgttcgcccatcgacgatctgtacaaagaattcaataaagtt
aatattgccgagaaaaaggccagtgatggtgatacaaattcaggaaagaaaggcgattca
tcgcctggaaccagtagagatgtgcaaccaagtacctcaactgctgcggcatctaacagt
agtgcagccaaaacgttggctgaatttttagccgaaaacaaaaatgccttacaaaacgaa
gaaatgttcgccgtgtatccactgaaaaactgtccacacttgagtagcctgaatcctgat
ctgtttgactccattgacacaacgaaaagttgcatggaatgtcaatcaacgagtgagaat
tggatatgcctcggttgtgctcaggtgttctgtggacgattcgtaaacgaacacatgttg
taccatcacctggacagtgatcatccgttgacgctgagttttgccgatctgtccgtatgg
tgttacaagtgtgactcgtacattgacaatccgtgtctgtttaagtataagaatttggcg
catcagagcaaatttggcgaggaaatggtatggtcgtacggaaatacgttagaattagac
gctcaatcgagtagtacgttatcttga
DBGET
integrated database retrieval system
