Bufo gargarizans (Asiatic toad): 122944967
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Entry
122944967 CDS
T07965
Symbol
BARD1
Name
(RefSeq) LOW QUALITY PROTEIN: BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122944967 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgar03019
]
122944967 (BARD1)
04121 Ubiquitin system [BR:
bgar04121
]
122944967 (BARD1)
03036 Chromosome and associated proteins [BR:
bgar03036
]
122944967 (BARD1)
03400 DNA repair and recombination proteins [BR:
bgar03400
]
122944967 (BARD1)
Messenger RNA biogenesis [BR:
bgar03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
122944967 (BARD1)
Ubiquitin system [BR:
bgar04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
122944967 (BARD1)
Chromosome and associated proteins [BR:
bgar03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
122944967 (BARD1)
DNA repair and recombination proteins [BR:
bgar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
122944967 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
zf-RING_6
Ank
Ank_4
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_5
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
Prok-RING_4
zf-RING_10
PTCB-BRCT
zf-C3HC4_4
zf-RING_2
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
122944967
NCBI-ProteinID:
XP_044159670
EnsemblRapid:
ENSBGGG00000018862
LinkDB
All DBs
Position
8:62056345..62113112
Genome browser
AA seq
781 aa
AA seq
DB search
MPLRVRSGNRPADTAADSTMKKELPDWNRTRTALLEMEGRLRCSVCLSLLRGPVCLGGCE
HVFCRTCVDGSVGNECPVCHTPAWVKDVQINRQLDTMIQLCSQLHNLLDKGKHNGSKVDL
CQHASLKENTAEGESKKKQIKMWFSPRRGKVRYVLEREENNQQIPSNCEQAPMLSSYDFV
SSSPIVEHAKKKTVKRGKTKKKQLEDINQKWGIGTPSENTDSFKVNNQESNRSVSFCSPP
LIENSPEKMELGLENNSPEKMELGLENHGEINTIENNTSKENDILKSGESASGAGQENDY
SFEPKPQENGQNKSQLEETVEDRPSPKLCTQLKNESSGKTKRRRTPLKRKPHPTPSPNSR
ASKCPKKEKLADDSKSEDHTGLGKVRNKEVKNSPKAEPKPKPFSTPRRKSQPGTNLQTSP
SDYQFTKKNHKGETMLHVASIKGEVHTVEELLKSGANPNIKDNAGWTPLHEACNHGHTNV
VEVLLRHHALVNTTGYQNDTPLHDAVKNGHVAIVRLLLQHGALQDAVNIFGLQPVDYAET
EEIKSALLQTRTDKKLHSPGPAPKVAQCREGSLIILASGLSTSQRTDLNKLVSLFKAEIC
TNYSSSVTHIIVGEEPMLRTMKCMMGILSGCWILRCAWLKTCLETKRREPEELHEVAGGP
HRARLNREQMLPSLLDGCHFYFLGCFKEHRKEDLIELVKAAGGQILIRQPKPDSDVTQTI
NTVAYHADAESDQRFCTQYIIYDKSSKFIPGRVRQGKVWFAPSSWLIECITSFHLLPVPQ
T
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgccactgagggtgcgctcgggaaaccgtcccgcagacaccgcggccgactctacgatg
aagaaggagctgccggactggaaccggacgcgaacggcgctgctggaaatggaggggaga
ctgcgctgctcagtatgtttgtcacttttaaggggcccggtgtgtttgggcggctgtgag
cacgtgttctgtaggacatgtgtagatgggagtgtgggtaatgaatgccctgtatgccac
acaccagcctgggtaaaggatgtgcagatcaaccgtcagcttgataccatgattcagctt
tgcagtcagctgcataacttactggataaagggaagcataatggaagtaaagtggattta
tgtcaacatgcatcactcaaagagaacaccgcagaaggagaatctaagaaaaaacagata
aagatgtggtttagcccccggagaggcaaggtgaggtatgtcttggaacgtgaagaaaac
aaccaacagattccatcaaactgcgaacaggcgccaatgttgtcaagttatgattttgtc
tcttcttcacccattgtggagcatgcgaaaaagaagactgtgaaacgtgggaaaacgaag
aagaagcaactggaggacataaaccaaaaatgggggattgggacacctagtgaaaatact
gatagcttcaaggtgaataaccaggaatccaatagatcggtgtccttttgcagccctcca
ctgattgaaaatagcccggagaagatggagctggggttagaaaataatagcccagagaag
atggagctggggttagaaaatcatggggaaataaacactattgagaacaacacctcgaaa
gaaaatgatattctgaagtctggcgagtctgcttctggtgctgggcaagaaaatgactac
agctttgaaccgaaaccacaagaaaatggacaaaataaaagtcagctagaggaaactgtg
gaagatcgacccagtccaaaattgtgtacacagctaaagaatgaatcttctggaaaaacc
aagcgaagaagaactcctctaaaacgcaaacctcacccaactccatctcctaattcccgt
gcctcaaaatgccccaaaaaagaaaagctggctgatgattccaagtcagaagatcataca
ggtcttggaaaagtccgaaacaaggaagtaaaaaattctccaaaagcagagccaaaacct
aagcccttttcaacacccagaagaaagagccaacctggaaccaatcttcagacatcccca
agtgattatcagtttacaaagaagaaccataagggtgagacaatgctacatgttgcttcc
ataaagggtgaggtgcacacggtggaggagctcctgaagagtggcgctaaccccaatatt
aaagacaatgctggatggactcctttgcatgaagcctgtaaccacgggcacactaatgtg
gtagaggtgctgcttcgacaccatgccctagtgaacactacggggtaccagaacgacacg
cctcttcatgacgctgtaaagaacggtcacgtagccatcgtccggcttcttctccagcac
ggggctctacaagatgcggttaatatattcggtctgcagccggtagactatgccgaaaca
gaggagatcaagtcggctttgctgcaaacacggacagacaagaagctgcacagtccgggc
cctgcgccaaaggtagcccagtgcagagaaggatccctcatcattttagcaagcggtttg
tctacctctcagagaactgatctcaacaagcttgtgtcattattcaaggcagaaatttgt
accaactacagcagctcagttactcacattatagttggagaagaacctatgctacgtacc
atgaagtgcatgatgggaatattatctggatgctggatcctccgatgtgcttggctaaag
acatgcctggagacaaagagacgagagccagaagaacttcatgaagtagccggcgggcct
caccgagctcggctcaacagagaacagatgctgccaagcctgttggacggatgtcatttt
tatttccttggatgtttcaaagaacacagaaaggaagacctaattgaactggtcaaagct
gctggcggccaaatcctaattcgccaaccaaaaccggatagtgatgtgacgcaaactatc
aacaccgtagcataccatgcagatgccgagtctgaccagagattctgtacacaatacatc
atctacgataagtcttccaaattcatcccgggcagggtgcgccaagggaaagtttggttt
gccccctcaagttggctgattgaatgtatcaccagctttcacctgctgccagtgcctcaa
acgtaa
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